☆26Sep 8, 2020Updated 5 years ago
Alternatives and similar repositories for Multi-Omics-Cancer-Benchmark
Users that are interested in Multi-Omics-Cancer-Benchmark are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆17Dec 9, 2019Updated 6 years ago
- Detecting cancer subtypes with machine learning.☆10Feb 5, 2020Updated 6 years ago
- DeepCC: a novel deep learning-based framework for cancer molecular subtype classification☆21Dec 1, 2021Updated 4 years ago
- Multi-view hierarchical clustering in R☆12Apr 24, 2024Updated last year
- An interpretable deep learning model for cancer classification using high-dimensional omics data☆18Jan 24, 2022Updated 4 years ago
- Subtyping tool for multi-omic data☆13Jul 6, 2022Updated 3 years ago
- a bioinformatics tool for simulating single-cell genome sequencing data☆10Dec 19, 2019Updated 6 years ago
- ☆66Nov 14, 2023Updated 2 years ago
- CEPICS: a comparison and evaluation platform for integration methods in cancer subtyping☆10Jun 6, 2020Updated 5 years ago
- a deep learning approach for integrative cancer subtyping of multi-omics data☆40May 5, 2024Updated last year
- Superseded by https://github.com/MD-Anderson-Bioinformatics/BatchEffectsPackage☆12Aug 13, 2020Updated 5 years ago
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/DRIMSeq.html Bug Reports: https://support.bioconductor.org/p/new/post/…☆12Aug 5, 2020Updated 5 years ago
- ☆11Jun 9, 2019Updated 6 years ago
- co-expressed gene-set enrichment analysis☆13Nov 20, 2023Updated 2 years ago
- ☆17May 5, 2020Updated 5 years ago
- An unsupervised approach for the integrative analysis of single-cell multi-omics data☆31Nov 16, 2020Updated 5 years ago
- ☆17Jan 9, 2023Updated 3 years ago
- PyIOmica (pyiomica) is a Python package for omics analyses.☆16Oct 6, 2025Updated 5 months ago
- scAce: an adaptive embedding and clustering method for scRNA-seq data☆12Sep 8, 2023Updated 2 years ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆28Jan 9, 2021Updated 5 years ago
- ☆15Mar 18, 2012Updated 14 years ago
- A GWAS course☆12Nov 4, 2021Updated 4 years ago
- code implementing methods for pooling bulk and single cell data and FISH data for copy number deconvolution☆10Jan 31, 2020Updated 6 years ago
- single cell and bulk RNASeq analysis scripts☆14Jan 13, 2022Updated 4 years ago
- A collection of multi-view datasets☆12Mar 22, 2022Updated 4 years ago
- R package to do enrichment analysis for neoantigens☆13Feb 21, 2022Updated 4 years ago
- 🏆 A ranked list of awesome machine learning Python libraries. Updated weekly.☆12Jan 17, 2021Updated 5 years ago
- Code for the meQTL analyses presented in Hawe et al. 2021 Nature Genetics☆14Jan 14, 2022Updated 4 years ago
- The official repository for the deepSNV bioconductor packages. Branch master tracks the official Bioconductor development branch.☆17Jun 1, 2022Updated 3 years ago
- A CNN - based pipeline for calling somatic SNP and INDEL variants without a matched normal☆11Sep 7, 2022Updated 3 years ago
- Tumor Phylogeny Reconstruction via Integrative use of Single Cell and Bulk Sequencing Data☆11Jul 13, 2020Updated 5 years ago
- Semi-parametric simulation of bulk and single cell RNA-seq data☆10Nov 17, 2024Updated last year
- A tool for investigating alternative mRNA splicing in next generation mRNA sequence data.☆11Mar 3, 2017Updated 9 years ago
- Group lasso based Deep Neural Network for Cancer Prognosis☆15Nov 15, 2019Updated 6 years ago
- ☆11Jun 13, 2024Updated last year
- Direct Gibbs sampling for DPMM using python.☆17Jun 2, 2017Updated 8 years ago
- Generate signature matrix from single cell data.☆11Apr 13, 2021Updated 4 years ago
- The release version of OMCmf code for paper "One-pass Multi-view Clustering with Matrix Factorization"☆13Nov 30, 2021Updated 4 years ago
- This is the CODE of Reciprocal Multi-Layer Subspace Learning for Multi-View Clustering☆15Nov 4, 2020Updated 5 years ago