a deep learning approach for integrative cancer subtyping of multi-omics data
☆41May 5, 2024Updated 2 years ago
Alternatives and similar repositories for Subtype-GAN
Users that are interested in Subtype-GAN are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Experimental evaluation and comparison of multi-omics data integration methods for cancer subtyping☆14Aug 13, 2021Updated 5 years ago
- Novel joint clustering method with scRNA-seq and CITE-seq data☆11Jun 22, 2021Updated 5 years ago
- Deep-Learning framework for multi-omic and survival data integration☆88Dec 20, 2023Updated 2 years ago
- Neural Network for Polygenic score analysis☆16Jan 25, 2023Updated 3 years ago
- Multi-task deep learning framework for multi-omics data analysis☆54May 5, 2022Updated 4 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆26Sep 8, 2020Updated 6 years ago
- MOGONET (Multi-Omics Graph cOnvolutional NETworks) is a novel multi-omics data integrative analysis framework for classification tasks in…☆189Mar 31, 2021Updated 5 years ago
- Gene- and Pathway-based Framework for Multi-omics Data Intergration☆10Jan 21, 2022Updated 4 years ago
- ☆67Nov 14, 2023Updated 2 years ago
- Exploring prognostic indicators in pathological images of hepatocellular carcinoma based on deep learning☆45Nov 24, 2020Updated 5 years ago
- shifts hg19/38 genomic position for feasible input format.☆12Jun 8, 2023Updated 3 years ago
- R package to do enrichment analysis for neoantigens☆13Feb 21, 2022Updated 4 years ago
- AI-enabled Mouse Organ Segmentation☆15Jan 26, 2021Updated 5 years ago
- Group lasso based Deep Neural Network for Cancer Prognosis☆14Nov 15, 2019Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Multi-omics integration method using AE and GCN☆42Jul 2, 2026Updated 4 months ago
- An explainable multi-omics graph integration method based on graph convolutional networks to predict cancer genes.☆166May 17, 2022Updated 4 years ago
- A new tool for harmonizing volumetric MRI data from unseen scanners (Garcia-Dias et al. 2020)☆18Jan 6, 2023Updated 3 years ago
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆23May 4, 2026Updated 5 months ago
- ☆13Feb 23, 2021Updated 5 years ago
- Deep convolutional conditional GAN implementation with CelebA dataset that allows for generation of custom faces according to textual inp…☆18Jun 15, 2021Updated 5 years ago
- ☆12Dec 17, 2023Updated 2 years ago
- Variational autoencoders learn universal latent representations of metabolomics data (supplementary code)☆14Jun 12, 2022Updated 4 years ago
- Code and dataset for SNP2Vec paper☆21May 12, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- An AI Approach Alternative to Animal Studies – a Case Study with Toxicogenomics☆17Oct 13, 2022Updated 4 years ago
- ☆10Jun 5, 2021Updated 5 years ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆20Dec 8, 2020Updated 5 years ago
- Visualizing Hypothesis Tests in Multivariate Linear Models☆14Oct 4, 2026Updated 3 weeks ago
- SSR: A Unifed Framework for Prediction in Secondary Structure of RNA. 整合了LinearFold, E2Efold, MXfold2算法,包含数据集,欢迎一键使用。☆10Dec 31, 2021Updated 4 years ago
- Example Code for Self-Supervised Feature Learning in Medical Volume Scans☆14Sep 20, 2019Updated 7 years ago
- ☆24Jun 17, 2024Updated 2 years ago
- ☆19May 5, 2020Updated 6 years ago
- A Companion Package for the Book "Data Integration, Manipulation and Visualization of Phylogenetic Trees"☆13Sep 15, 2022Updated 4 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- code implementing methods for pooling bulk and single cell data and FISH data for copy number deconvolution☆10Jan 31, 2020Updated 6 years ago
- ☆17Feb 6, 2020Updated 6 years ago
- A pipeline to generate a Deep Nerual Network cell type deconvolution model for bulk RNASeq samples from single cell experiment data☆12Nov 17, 2020Updated 5 years ago
- Bioconductor2017 workshop - Analysis of single-cell RNA-seq data: Normalization, dimensionality reduction, clustering, and lineage infere…☆11Aug 4, 2017Updated 9 years ago
- Classifying tumor types based on Whole Genome Sequencing (WGS) data☆50Nov 20, 2023Updated 2 years ago
- An unsupervised approach for the integrative analysis of single-cell multi-omics data☆33Nov 16, 2020Updated 5 years ago
- single cell and bulk RNASeq analysis scripts☆13Jan 13, 2022Updated 4 years ago