UK-Biobank / UKB-RAP-Notebooks-AccessLinks
UKB RAP Notebooks contains a collection of examples of how to use UK Biobank Research Analyses Platform (RAP).
☆98Updated 3 weeks ago
Alternatives and similar repositories for UKB-RAP-Notebooks-Access
Users that are interested in UKB-RAP-Notebooks-Access are comparing it to the libraries listed below
Sorting:
- Access share reviewed code & Jupyter Notebooks for use on the UK Biobank (UKBB) Research Application Platform. Includes resources from DN…☆178Updated 10 months ago
- ☆31Updated 4 months ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆146Updated last year
- Tools for processing Nightingale NMR biomarker data in UK Biobank☆35Updated 6 months ago
- ☆82Updated last year
- Create a PheWAS code based phenome using ICD9 and ICD10 data from baskets of the UK biobank☆26Updated last year
- UKB Phenotype process☆45Updated this week
- Data analysis scripts for "Atlas of plasma NMR biomarkers for health and disease in 118,461 individuals from the UK Biobank".☆13Updated 2 years ago
- Scripts and workflows for use analyzing UK Biobank data from the DNANexus Research Analysis Platform☆62Updated 3 weeks ago
- Quality control, annotation, association test, and post analysis☆11Updated last year
- A curated list for preprocessing, cleaning, mapping and analyzing UK Biobank data.☆50Updated 2 years ago
- A Python module for loading phenotypic and genetic data from the UK Biobank.☆35Updated 3 years ago
- ☆31Updated 7 months ago
- An R package to manipulate and explore UK Biobank data☆105Updated 2 years ago
- ☆40Updated 3 years ago
- Analysis code for applied UK Biobank analyses in Mendelian randomisation for mediation analysis and example code for MR and mediation ana…☆12Updated 5 years ago
- Hypothesis Prioritisation in multi-trait Colocalization☆53Updated last year
- ☆68Updated 11 months ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆50Updated 4 years ago
- Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.☆90Updated last year
- GWAS Summary Statistics for Brain Imaging Phenotypes☆20Updated 3 years ago
- ☆41Updated 10 months ago
- ☆41Updated 4 months ago
- A tool for identifying patients in UK biobank given the definition of disease phenotypes (icd10, icd9, opcs or cancer histology).☆20Updated 6 years ago
- ☆41Updated 4 months ago
- R package for CAUSE☆55Updated last year
- Data objects for various sets of instruments☆44Updated 4 years ago
- R package to perform two-sample Mendelian Randomisation (MR) analyses using (potentially) overlapping samples☆60Updated 4 months ago
- Perform cell-stratified MR analysis through integrating GWAS and QTL data☆26Updated 7 months ago
- Mendelian Randomization accounting for Pleiotropy and Sample Structure using genome-wide summary statistics☆42Updated last month