AI-sandbox / SALAI-NetLinks
☆15Updated 10 months ago
Alternatives and similar repositories for SALAI-Net
Users that are interested in SALAI-Net are comparing it to the libraries listed below
Sorting:
- Scripts to do haplotype analysis on pan genomes.☆20Updated 5 years ago
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆20Updated last week
- Ascertained Sequentially Markovian Coalescent☆16Updated 3 months ago
- ☆11Updated 11 months ago
- HaploSweep is a method for detecting and categorizing soft and hard selective sweeps based on haplotype structure.☆11Updated last year
- Haplotype and population structure inference using neural networks.☆28Updated last year
- RegCloser is a genome gap-closing tool based on the robust regression approach, which is conceptually applicable to de novo assembly of N…☆15Updated last year
- Consensus genome annotation using OMA☆31Updated 3 weeks ago
- The GitHub for CLUES2, a method for inferring and evaluating evidence for selection.☆18Updated 10 months ago
- Tools for haplotype-wise reconstruction of pseudomolecules☆22Updated 5 months ago
- A program to generate a graph which presents a simplified representation of several full length genomes☆13Updated 7 years ago
- ☆15Updated 4 years ago
- Modified TIR-Learner for Rice genome☆12Updated 6 years ago
- ☆12Updated 5 years ago
- A method for measuring chromosome-specific telomere length from long reads☆22Updated last year
- ☆16Updated 3 years ago
- A tool to calculate ploidy levels from genotype likelihoods and coverage using Hidden Markov Models☆18Updated 3 years ago
- Fast and flexible inference of the distribution of fitness effects (DFE), VCF-SFS parsing with ancestral allele and site-degeneracy annot…☆18Updated 2 weeks ago
- ☆17Updated last year
- A Hi-C scaffolding method☆22Updated 4 years ago
- plot genome alignment synteny☆21Updated 5 years ago
- Identification of conserved non-coding sequences in plants☆32Updated this week
- Diamond2GO is a set of tools that can rapidly assign Gene Ontology (GO) terms and perform functional enrichment for large-scale functiona…☆24Updated this week
- A nextflow pipeline for polishing CLR assemblies☆18Updated 3 years ago
- Bash scripts and data used in pantranscriptomic paper☆24Updated 3 years ago
- SINE annotation tool for plant genomes☆18Updated 2 years ago
- Convert RepeatMasker ".out" file into a gff3 with colors!!!☆24Updated 5 years ago
- ksrates is a tool to position whole-genome duplications relative to speciation events using substitution-rate-adjusted mixed paralog-orth…☆20Updated 2 weeks ago
- TD2☆31Updated 3 weeks ago
- ☆11Updated 10 months ago