opain / GenoPredLinks
Genotype-based Prediction (GenoPred)
☆75Updated 2 weeks ago
Alternatives and similar repositories for GenoPred
Users that are interested in GenoPred are comparing it to the libraries listed below
Sorting:
- Analyses conducting GWAS across the UKBB diverse superpopulations☆59Updated 3 weeks ago
- Software for estimating correlation of trait effect sizes across populations☆50Updated 5 months ago
- Fine-tuning polygenic risk score models using GWAS summary statistics☆54Updated last month
- FOCUS: Fine-mapping Of CaUsal gene Sets☆47Updated 2 years ago
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆35Updated 5 months ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 4 years ago
- Cross-population polygenic prediction☆90Updated last week
- ☆44Updated 4 months ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42Updated 7 years ago
- Colocalization analysis of genetic association signals☆53Updated 5 months ago
- GWAS Summary Statistics Data Harmonisation☆24Updated 3 weeks ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆69Updated last year
- ☆37Updated 4 years ago
- ☆57Updated 10 months ago
- ☆23Updated 2 years ago
- An R package for creating mirrored Manhattan plots☆18Updated 3 years ago
- Pariwise analysis of GWAS☆44Updated 7 years ago
- Make LocusZoom-like plots with your own LD matrix.☆47Updated 3 years ago
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆31Updated last year
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆20Updated 3 years ago
- Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337☆18Updated last year
- ☆34Updated this week
- corrplot of LDSC genetic correlation results☆56Updated 3 years ago
- Regional association plots☆25Updated last year
- Fast, integrative fine mapping with functional data☆61Updated 6 years ago
- An R package for performing STAAR procedure in whole-genome sequencing studies☆95Updated 9 months ago
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆36Updated last year
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆41Updated 2 years ago
- FLAMES: Accurate gene prioritization in GWAS loci☆54Updated 8 months ago
- ☆85Updated 3 months ago