☆30Oct 14, 2024Updated last year
Alternatives and similar repositories for GEARS_misc
Users that are interested in GEARS_misc are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- GEARS is a geometric deep learning model that predicts outcomes of novel multi-gene perturbations☆390Feb 1, 2025Updated last year
- ☆19May 23, 2025Updated last year
- PerturbNet is a deep generative model that can predict the distribution of cell states induced by chemical or genetic perturbation☆66Jan 12, 2026Updated 6 months ago
- Modeling and predicting single-cell multi-gene perturbation responses with scLAMBDA☆27Mar 20, 2026Updated 4 months ago
- Single-Cell (Perturbation) Model Library☆125Jul 27, 2026Updated 2 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆12May 14, 2025Updated last year
- ☆99Aug 12, 2024Updated last year
- Interpret perturbation responses from scRNA-seq perturbation experiments☆16Mar 4, 2025Updated last year
- ☆17Jan 30, 2026Updated 6 months ago
- ☆12Aug 19, 2025Updated 11 months ago
- An end-to-end computational pipeline for large Perturb-seq screens☆16Jul 27, 2026Updated 2 weeks ago
- Comprehensive suite for evaluating perturbation prediction models☆148Jul 27, 2026Updated 2 weeks ago
- ☆70Jan 14, 2026Updated 6 months ago
- Perturbational analysis by causality-aware generative model for single-cell RNA-sequencing data☆23Dec 16, 2025Updated 7 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆16Dec 18, 2024Updated last year
- Predicting Cellular Responses with Variational Causal Inference and Refined Relational Information (ICLR 2023)☆18Jun 15, 2025Updated last year
- Models and datasets for perturbational single-cell omics☆180Aug 19, 2022Updated 3 years ago
- ☆91Jul 18, 2025Updated last year
- State is a machine learning model that predicts cellular perturbation response across diverse contexts☆629Jul 24, 2026Updated 2 weeks ago
- ☆1,613Apr 29, 2026Updated 3 months ago
- ☆50Sep 23, 2025Updated 10 months ago
- ☆321Mar 18, 2024Updated 2 years ago
- Modeling complex perturbations with CellFlow☆153Aug 3, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- [Cell Patterns] Codes for paper: scELMo: Embeddings from Language Models are Good Learners for Single-cell Data Analysis☆24Jan 31, 2026Updated 6 months ago
- Variant impact phenotyping using Perturb-seq☆10Apr 22, 2024Updated 2 years ago
- ☆12May 30, 2023Updated 3 years ago
- Official pytorch implementation for paper "Joint Velocity-Growth Flow Matching for Single-Cell Dynamics Modeling" (NeurIPS 2025)☆20Jan 5, 2026Updated 7 months ago
- ☆14Jun 22, 2026Updated last month
- BioDiscoveryAgent is an LLM-based AI agent for closed-loop design of genetic perturbation experiments☆118Jul 6, 2025Updated last year
- post-clustering differential expression test☆37May 28, 2019Updated 7 years ago
- ☆182Jan 30, 2026Updated 6 months ago
- Score an Affinity Purification Mass Spectrometry Proteomics Experiment for Interactor Confidence☆11Jun 24, 2015Updated 11 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆17Apr 23, 2021Updated 5 years ago
- ☆39Apr 16, 2025Updated last year
- The open-source SDK for bringing any agent into any chat platform: Slack, Microsoft Teams, Discord, Telegram - with native, Interactive U…☆820Updated this week
- 🏃 The go-to single-cell Foundation Model☆156Updated this week
- Jeroen Cottaar's work for the Kaggle Geophysical Waveform Inversion competition (2nd place)☆13Aug 11, 2025Updated 11 months ago
- ☆118Aug 18, 2025Updated 11 months ago
- Public Codebase supporting the paper "Modeling Cellular Perturbations with The Sparse Additive Mechanism Shift Variational Autoencoder" b…☆16Oct 20, 2023Updated 2 years ago