greenelab / RNAseq_titration_resultsLinks
Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously
☆37Updated 2 years ago
Alternatives and similar repositories for RNAseq_titration_results
Users that are interested in RNAseq_titration_results are comparing it to the libraries listed below
Sorting:
- Explore the cancer relevance of your gene list☆51Updated 5 months ago
- Course Materials for Genomics Data Mining☆22Updated 2 months ago
- BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses☆22Updated 4 years ago
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆43Updated 5 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- ARCHS4 RNA-seq processing scripts and web server pages.☆58Updated 4 years ago
- Code to reproduce TNBC analysis and figures☆24Updated 3 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated 2 years ago
- GEO RNA-seq Experiments Processing Pipeline☆21Updated 5 years ago
- QBRC Neoantigen calling pipeline with CSiN calculation embedded☆24Updated 3 years ago
- TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages☆46Updated 2 years ago
- Explore and download data from the recount3 project☆35Updated 2 months ago
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆38Updated 6 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated 2 months ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆56Updated last year
- A single-cell and spatial RNA-seq database for Alzheimer’s Disease☆24Updated last year
- ConsensusTME Gene Sets and R Script☆39Updated last year
- Easy and comprehensive biological network reconstruction and analysis☆31Updated 10 months ago
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆29Updated 2 years ago
- Fast motif matching in R☆46Updated last year
- Harvard FAS informatics scRNAseq workshop website☆38Updated 5 years ago
- ☆36Updated last year
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆29Updated 5 years ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- ☆44Updated 9 months ago
- Pathway-Level Information Extractor (PLIER): a generative model for gene expression data☆54Updated 11 months ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆28Updated 2 years ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆50Updated 6 years ago
- ☆47Updated last year
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 5 years ago