greenelab / RNAseq_titration_resultsLinks
Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously
☆37Updated 2 years ago
Alternatives and similar repositories for RNAseq_titration_results
Users that are interested in RNAseq_titration_results are comparing it to the libraries listed below
Sorting:
- Explore the cancer relevance of your gene list☆52Updated 3 weeks ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆50Updated 6 years ago
- TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages☆49Updated 2 years ago
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆44Updated 5 years ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆57Updated last year
- ARCHS4 RNA-seq processing scripts and web server pages.☆62Updated 5 years ago
- Explore and download data from the recount3 project☆37Updated 3 months ago
- GEO RNA-seq Experiments Processing Pipeline☆22Updated 6 years ago
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆29Updated 2 years ago
- Epimap processing and analysis code repository☆33Updated 3 years ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆28Updated 2 years ago
- Course Materials for Genomics Data Mining☆22Updated 3 months ago
- Fast motif matching in R☆46Updated last year
- Cancer Dependency Map package☆33Updated last year
- QBRC Neoantigen calling pipeline with CSiN calculation embedded☆25Updated 3 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 4 years ago
- Quickomics: exploring omics data in an intuitive, interactive and informative manner. Bioinformatics. 2021 Apr 26:btab255.☆42Updated 2 months ago
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆39Updated 7 years ago
- documentation for trackViewer☆29Updated 6 years ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆24Updated 6 months ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆46Updated 2 years ago
- ☆26Updated 7 months ago
- An R Package for Geneset Enrichment Workflows☆76Updated last month
- Code and additional processed data for manuscript "Tumor and Microenvironment Evolution during Immunotherapy with Nivolumab"; see for man…☆52Updated 7 years ago
- Computational correction of copy-number effect in CRISPR-Cas9 essentiality screens☆32Updated 6 years ago
- scRNAseq integration with triplet neural networks☆41Updated 3 years ago
- A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries☆16Updated 5 years ago
- Adaptive Daisy Model to discriminate core-fitness/context-specific essential genes in large scale CRISPR-Cas9 screens☆24Updated 6 years ago
- Identify and correct invalid gene symbols☆61Updated last year
- A continually expanding collection of RNA-seq tools☆53Updated 3 months ago