greenelab / RNAseq_titration_results
Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously
☆35Updated last year
Alternatives and similar repositories for RNAseq_titration_results:
Users that are interested in RNAseq_titration_results are comparing it to the libraries listed below
- ARCHS4 RNA-seq processing scripts and web server pages.☆54Updated 4 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆44Updated last year
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆26Updated 4 years ago
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆42Updated 4 years ago
- Explore the cancer relevance of your gene list☆49Updated 5 months ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆35Updated 3 years ago
- Zhang, et al, Nature Immunology, 2019. Use single-cell transcriptomics and proteomics to study autoimmune diseases.☆19Updated 4 years ago
- ConsensusTME Gene Sets and R Script☆39Updated 8 months ago
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆38Updated 6 years ago
- Hierarchical HotNet is an algorithm for finding hierarchies of active subnetworks.☆36Updated 5 years ago
- ☆47Updated 2 years ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆48Updated 5 years ago
- 10x single cell RNA-seq data from the developing mouse retina☆16Updated 3 years ago
- ☆42Updated 3 months ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 4 years ago
- Materials and scripts for building cell type encyclopedia table☆18Updated last month
- ☆47Updated last year
- ☆20Updated 3 years ago
- A single-cell and spatial RNA-seq database for Alzheimer’s Disease☆22Updated 6 months ago
- Code to reproduce TNBC analysis and figures☆23Updated 2 years ago
- Relative Expression Ordering Analysis (REOA) package☆20Updated 2 years ago
- Code related to the Celligner manuscript☆45Updated 4 years ago
- Transcription Factor Binding Prediction from ATAC-seq and scATAC-seq with Deep Neural Networks☆27Updated this week
- cancereffectsizeR: Estimate somatic mutation rates and quantify selection in cancer☆17Updated last week
- ☆26Updated 3 months ago
- Please consider using/contributing to https://github.com/nf-core/scdownstream☆24Updated 8 months ago
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 5 years ago
- 🏺 Exploring novel tumor epitope identification☆35Updated 4 years ago
- GENIE3 (GEne Network Inference with Ensemble of trees) R-package☆30Updated 2 years ago