Alternatives and similar repositories for myScRNA-seq

Users that are interested in myScRNA-seq are comparing it to the libraries listed below

• jmzeng1314 / IRseq
  ☆10Updated 8 years ago
• jmzeng1314 / ChIP-seq-analysis
  ChIP-seq analysis notes from Tommy Tang
  ☆19Updated 9 years ago
• jmzeng1314 / TCGA_BRCA
  ☆47Updated 6 years ago
• YutingPKU / SingleCell-Multiomics
  ☆71Updated 3 years ago
• QuKunLab / ATAC-pipe
  Analysis pipeline for ATAC-seq Data
  ☆62Updated 4 years ago
• GreenleafLab / 10x-scATAC-2019
  Publication Page for Satpathy*, Granja* et al 2019
  ☆95Updated 5 years ago
• jmzeng1314 / ML
  ☆24Updated 8 years ago
• youqiongye / HAMFA
  Hypoxia associated molecular feature analysis
  ☆36Updated 6 years ago
• MSZaki / Aging-and-CR-rat-atlas
  Single cell RNA analysis about paper “Caloric restriction reprograms the single-cell transcriptional landscape of Rattus norvegicus aging…
  ☆29Updated 5 years ago
• dgrun / RaceID3_StemID2
  Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. Please download the R package from the RaceID3…
  ☆15Updated 7 years ago
• lessonskit / Single-cell-RNA-sequencing-of-human-kidney
  R-code used for single-cell RNA-Seq analysis of kidney data.
  ☆18Updated 6 years ago
• jmzeng1314 / survival
  ☆17Updated 6 years ago
• gatelabNW / csf_aging
  Single cell transcriptomics reveals cerebrospinal fluid immune dysregulation during healthy brain aging and cognitive impairment
  ☆28Updated 2 years ago
• Dragonlongzhilin / RenalTumor
  Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma
  ☆80Updated last year
• FredHutch / Galeano-Nino-Bullman-Intratumoral-Microbiota_2022
  Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022
  ☆38Updated last year
• tallulandrews / scRNASeqPipeline
  ☆118Updated 7 years ago
• czbiohub-sf / scell_lung_adenocarcinoma
  This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset
  ☆152Updated 4 years ago
• IzarLab / CUIMC-NYP_COVID_autopsy_lung
  ☆43Updated 4 years ago
• jmzeng1314 / BPscRNAseq
  ☆10Updated 7 years ago
• single-cell-genetics / cellSNP
  Pileup biallelic SNPs from single-cell and bulk RNA-seq data
  ☆81Updated 3 years ago
• rpolicastro / scProportionTest
  ☆73Updated 2 years ago
• jmzeng1314 / GSE76275-TNBC
  ☆17Updated 5 years ago
• LocasaleLab / Single-Cell-Metabolic-Landscape
  Pipeline for exploring metebolic heterogeneity at single-cell resolution
  ☆74Updated 5 years ago
• Japrin / sscClust
  simpler single cell RNAseq data clustering
  ☆42Updated 9 months ago
• SGI-LungCancer / SingleCell
  Code repository for single cell RNA-seq
  ☆39Updated 5 years ago
• MGI-tech-bioinformatics / DNBelab_C_Series_HT_scRNA-analysis-software
  The official pipeline for flexible and high-performance analysis of DNBelab C Serie single-cell data.
  ☆124Updated 3 weeks ago
• mathyslab7 / ROSMAP_snRNAseq_PFC
  ☆31Updated 2 years ago
• livnatje / ImmuneResistance
  This resource provides the code developed in the study of Jerby-Arnon _et al. "Single-cell RNA-seq of melanoma ecosystems reveals sources…
  ☆73Updated 7 years ago
• AntonioDeFalco / SCEVAN
  R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …
  ☆113Updated this week
• akdess / CaSpER
  ☆88Updated 4 years ago