Detection of evolutionary shifts in Ornstein-Uhlenbeck models
☆19Aug 5, 2022Updated 3 years ago
Alternatives and similar repositories for l1ou
Users that are interested in l1ou are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Bayesian species delimitation integrating genes and traits☆12Aug 17, 2021Updated 4 years ago
- Implementation of the EM algorithm for the detection of shifts in a phylogeny.☆19Sep 24, 2025Updated 10 months ago
- Homologizer: phasing gene copies into polyploid subgenomes☆13Feb 3, 2026Updated 5 months ago
- Simulation package for getting gene tree distributions and loci / SNPs from input tree topologies and migration / Ne scenarios. Wraps aro…☆14Apr 20, 2024Updated 2 years ago
- A birth-death-hybridization based phylogenetic network simulator.☆11Oct 2, 2024Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Welcome to the offical webpage for the R-package ‘humboldt’☆19May 11, 2026Updated 2 months ago
- RNA-seq data amalgamation for a large-scale evolutionary transcriptomics☆13Jul 22, 2026Updated last week
- ☆36Mar 5, 2026Updated 4 months ago
- diversitree: comparative phylogenetic analyses of diversification☆33Oct 2, 2024Updated last year
- An R function to compute Concordance Factors from SNP datasets☆16Dec 4, 2025Updated 7 months ago
- Convergent substitution detection tool based on the PCOC model☆31Dec 2, 2021Updated 4 years ago
- Newick tree processing☆13Updated this week
- R package to perform sensitivity analysis for comparative methods☆14Jun 10, 2020Updated 6 years ago
- A suite of methods and models for studying evolutionary radiations☆25Feb 22, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Performs MCMCglmm on multiple phylogenetic trees☆11Apr 17, 2025Updated last year
- Phylogenetic Comparative Tools for Missing Data and Within-Species Variation☆33Jul 21, 2026Updated last week
- Automated Phylogeny Generation for Ecologists☆15Feb 17, 2017Updated 9 years ago
- mPTP - a tool for single-locus species delimitation☆30Mar 14, 2026Updated 4 months ago
- ☆22Jun 24, 2026Updated last month
- Possvm: find clusters of orthologs in phylogenies using species overlap & MCL☆19Jul 19, 2024Updated 2 years ago
- A book for teaching people how to do comparative methods in R☆22Jul 28, 2023Updated 3 years ago
- Workflow to detect and phase hybrids in target capture data☆20Mar 9, 2023Updated 3 years ago
- R package for analysis of hybrids and hybrid zones☆21Dec 30, 2023Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A Julia package for estimating phylogenetic networks from genomic data☆20Jun 3, 2024Updated 2 years ago
- PhyloNetworks: a julia package with utilities for phylogenetic networks☆176Updated this week
- Ornstein-Uhlenbeck models for phylogenetic comparative hypotheses☆16Mar 23, 2026Updated 4 months ago
- PhyloBayes: phylogenetic reconstruction using infinite mixtures (CAT and CAT-GTR) -- serial version (for MPI, see pbmpi.git)☆14Oct 21, 2021Updated 4 years ago
- Analyzing combinations of codon substitution histories☆48Updated this week
- A program for multimodel inference on speciation and trait evolution☆35Sep 4, 2017Updated 8 years ago
- ☆24Feb 11, 2026Updated 5 months ago
- Phylogenetic Network Inference without ILS☆19Jul 31, 2022Updated 3 years ago
- Gene-tree Reconciliation Algorithm with MUL-trees for Polyploid Analysis☆16Jul 25, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Methods for finding associations between phenotypic and genomic differences between species using the Forward Genomics framework☆24Mar 26, 2026Updated 4 months ago
- Rapid, interactive, probabilistic analysis of convergent molecular evolution☆16Feb 11, 2026Updated 5 months ago
- ☆48Sep 5, 2023Updated 2 years ago
- Hands-on tutorial about Meta RL and GP-MPC at the RL4AA'24 workshop.☆15Apr 20, 2026Updated 3 months ago
- Bayesian estimation of the evolutionary rate matrix.☆10Dec 8, 2025Updated 7 months ago
- ☆13Mar 8, 2024Updated 2 years ago
- Automorphism groups for CSets - generalizing the nauty algorithm to a broad class of data structures☆13Oct 30, 2023Updated 2 years ago