Detection of evolutionary shifts in Ornstein-Uhlenbeck models
☆19Aug 5, 2022Updated 3 years ago
Alternatives and similar repositories for l1ou
Users that are interested in l1ou are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Bayesian species delimitation integrating genes and traits☆12Aug 17, 2021Updated 4 years ago
- Implementation of the EM algorithm for the detection of shifts in a phylogeny.☆19Sep 24, 2025Updated 8 months ago
- Homologizer: phasing gene copies into polyploid subgenomes☆11Feb 3, 2026Updated 3 months ago
- Simulation package for getting gene tree distributions and loci / SNPs from input tree topologies and migration / Ne scenarios. Wraps aro…☆14Apr 20, 2024Updated 2 years ago
- ☆36Mar 5, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- diversitree: comparative phylogenetic analyses of diversification☆33Oct 2, 2024Updated last year
- An R function to compute Concordance Factors from SNP datasets☆16Dec 4, 2025Updated 5 months ago
- A birth-death-hybridization based phylogenetic network simulator.☆11Oct 2, 2024Updated last year
- Convergent substitution detection tool based on the PCOC model☆31Dec 2, 2021Updated 4 years ago
- Newick tree processing☆13Mar 25, 2026Updated 2 months ago
- R package to perform sensitivity analysis for comparative methods☆14Jun 10, 2020Updated 5 years ago
- Welcome to the offical webpage for the R-package ‘humboldt’☆19May 11, 2026Updated 2 weeks ago
- RNA-seq data amalgamation for a large-scale evolutionary transcriptomics☆13Apr 15, 2026Updated last month
- Performs MCMCglmm on multiple phylogenetic trees☆12Apr 17, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Phylogenetic Comparative Tools for Missing Data and Within-Species Variation☆32Jan 15, 2023Updated 3 years ago
- A book for teaching people how to do comparative methods in R☆22Jul 28, 2023Updated 2 years ago
- Possvm: find clusters of orthologs in phylogenies using species overlap & MCL☆19Jul 19, 2024Updated last year
- Workflow to detect and phase hybrids in target capture data☆20Mar 9, 2023Updated 3 years ago
- mPTP - a tool for single-locus species delimitation☆30Mar 14, 2026Updated 2 months ago
- Ornstein-Uhlenbeck models for phylogenetic comparative hypotheses☆16Mar 23, 2026Updated 2 months ago
- ☆21Dec 30, 2025Updated 5 months ago
- PhyloBayes: phylogenetic reconstruction using infinite mixtures (CAT and CAT-GTR) -- serial version (for MPI, see pbmpi.git)☆15Oct 21, 2021Updated 4 years ago
- R package for analysis of hybrids and hybrid zones☆21Dec 30, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Analyzing combinations of codon substitution histories☆47Apr 7, 2026Updated last month
- A Julia package for estimating phylogenetic networks from genomic data☆20Jun 3, 2024Updated last year
- PhyloNetworks: a julia package with utilities for phylogenetic networks☆176Mar 30, 2026Updated last month
- Phylogenetic Network Inference without ILS☆19Jul 31, 2022Updated 3 years ago
- ☆24Feb 11, 2026Updated 3 months ago
- Gene-tree Reconciliation Algorithm with MUL-trees for Polyploid Analysis☆16Jul 25, 2025Updated 10 months ago
- Bayesian estimation of the evolutionary rate matrix.☆10Dec 8, 2025Updated 5 months ago
- Rapid, interactive, probabilistic analysis of convergent molecular evolution☆16Feb 11, 2026Updated 3 months ago
- Methods for finding associations between phenotypic and genomic differences between species using the Forward Genomics framework☆24Mar 26, 2026Updated 2 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Analysis of convergence between organismal traits and DNA/protein sequences☆66Apr 17, 2026Updated last month
- A textbook for phylogenetic comparative methods.☆43Sep 20, 2019Updated 6 years ago
- Automorphism groups for CSets - generalizing the nauty algorithm to a broad class of data structures☆14Oct 30, 2023Updated 2 years ago
- Examples of application of comparative methods in R☆60Oct 3, 2022Updated 3 years ago
- PhyloAcc a software to detect the changes of conservation of a genomic region☆36May 11, 2026Updated 2 weeks ago
- ☆68Oct 17, 2023Updated 2 years ago
- ☆46Sep 5, 2023Updated 2 years ago