Alternatives and similar repositories for BioGeoBEARS

Users that are interested in BioGeoBEARS are comparing it to the libraries listed below

• wtesto / SpeciesOccurrenceMapping
  Species occurrence dot maps in R
  ☆21Updated 3 years ago
• wxguillo / machuruku
  Machuruku
  ☆32Updated 5 months ago
• Tom-Jenkins / mapmixture
  R package and web app for spatial visualisation of admixture on a projected map
  ☆44Updated 3 months ago
• macroevolution / bamm
  A program for multimodel inference on speciation and trait evolution
  ☆33Updated 7 years ago
• bodkan / demografr
  Fast and simple simulation-based population genetic inference in R
  ☆27Updated last week
• simjoly / CourseComparativeMethods
  Examples of application of comparative methods in R
  ☆59Updated 2 years ago
• ivanlfm / BGB_BSM_multiple_trees
  Script to run ancestral range estimation + biogeographic stochastic maps over a sample of phylogenetic trees.
  ☆9Updated 8 months ago
• nstenz / TICR
  ☆26Updated 4 years ago
• gbradburd / conStruct
  method for modeling continuous and discrete population genetic structure
  ☆36Updated last year
• HullUni-bioinformatics / metaBEAT
  Metabarcoding analyses pipeline - metaBarcoding and Environmental DNA Analysis Tool
  ☆19Updated 6 years ago
• jgx65 / hierfstat
  the hierfstat package
  ☆25Updated 7 months ago
• grunwaldlab / poppr
  🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
  ☆71Updated 3 weeks ago
• blackrim / treePL
  Phylogenetic penalized likelihood
  ☆49Updated 2 weeks ago
• lmcai / PhyloHerb
  PHYLOgenomic analysis pipeline for HERBarium specimens
  ☆17Updated 2 months ago
• VascoElbrecht / JAMP
  JAMP - Just Another Metabarcoding Pipeline
  ☆36Updated 3 years ago
• royfrancis / pophelper
  An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.
  ☆150Updated last year
• nmatzke / BEASTmasteR
  R code for writing Beast2 XML (especially morphology/tip-dating)
  ☆11Updated last year
• gehara / PipeMaster
  An R Package to build and simulate coalescent models
  ☆20Updated last year
• defleury / Schmidt_et_al_2016_community_similarity
  Analysis code for a manuscript on community similarity computation
  ☆14Updated 6 years ago
• lamho86 / phylolm
  ☆37Updated 8 months ago
• pmartinezarbizu / pairwiseAdonis
  Pairwise multilevel comparison using adonis
  ☆77Updated 2 years ago
• TheWangLab / algatr
  A Landscape Genomic Analysis Toolkit in R
  ☆20Updated last week
• MPCMEvolution / MPCMArchive
  Archive of Online Practical Materials for the book of Modern Phylogenetic Comparative Methods (ed. Garamszegi, 2014)
  ☆21Updated 2 years ago
• mwpennell / geiger-v2
  A suite of methods and models for studying evolutionary radiations
  ☆24Updated 2 years ago
• fkeck / phylosignal
  Exploring the Phylogenetic Signal in Continuous Traits
  ☆18Updated last month
• stevemussmann / BayesAss3-SNPs
  Modification of BayesAss 3.0.4 to allow handling of large SNP datasets
  ☆16Updated 3 years ago
• TillMacher / TaxonTableTools
  TaxonTableTools - A comprehensive, platform-independent graphical user interface software to explore and visualise DNA metabarcoding data
  ☆22Updated 2 years ago
• heibl / ips
  R Interfaces to Phylogenetic Software
  ☆12Updated 5 months ago
• GuillemSalazar / EcolUtils
  Utilities for community ecology analysis
  ☆19Updated 4 years ago
• sculab / RASP
  Reconstruct Ancestral State in Phylogenies
  ☆21Updated last year