heibl / ips

Related projects ⓘ

Alternatives and complementary repositories for ips

• nmatzke / BEASTmasteR
  R code for writing Beast2 XML (especially morphology/tip-dating)
  ☆11Updated 4 months ago
• hmorlon / PANDA
  Phylogenetic ANalyses of DiversificAtion
  ☆24Updated 3 months ago
• ropensci / phylotaR
  An automated pipeline for retrieving orthologous DNA sequences from GenBank in R
  ☆23Updated 3 months ago
• HullUni-bioinformatics / metaBEAT
  Metabarcoding analyses pipeline - metaBarcoding and Environmental DNA Analysis Tool
  ☆18Updated 5 years ago
• macroevolution / bamm
  A program for multimodel inference on speciation and trait evolution
  ☆33Updated 7 years ago
• wtesto / SpeciesOccurrenceMapping
  Species occurrence dot maps in R
  ☆18Updated 2 years ago
• TGuillerme / mulTree
  Performs MCMCglmm on multiple phylogenetic trees
  ☆12Updated 8 months ago
• lmcai / PhyloHerb
  PHYLOgenomic analysis pipeline for HERBarium specimens
  ☆17Updated 11 months ago
• wxguillo / machuruku
  Machuruku
  ☆30Updated 5 months ago
• nmatzke / BioGeoBEARS
  BioGeography with Bayesian (and likelihood) Evolutionary Analysis with R Scripts
  ☆57Updated 3 weeks ago
• gauravsk / ranacapa
  R package for downstream analysis for anacapa eDNA pipeline
  ☆22Updated 2 years ago
• lamho86 / phylolm
  ☆32Updated this week
• ropensci / babette
  babette is an R package to work with BEAST2
  ☆44Updated 4 months ago
• grunwaldlab / poppr
  🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
  ☆68Updated 5 months ago
• fkeck / phylosignal
  Exploring the Phylogenetic Signal in Continuous Traits
  ☆16Updated last year
• leffj / mctoolsr
  Microbial community analysis tools in R
  ☆20Updated 2 years ago
• lvclark / polyRAD
  Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝
  ☆27Updated 10 months ago
• ropensci / onekp
  Access sequences from the 1000 Plant Initiative (1KP)
  ☆12Updated last year
• skembel / picante
  R tools for integrating phylogenies and ecology
  ☆33Updated 10 months ago
• bomeara / ComparativeMethodsInR
  A book for teaching people how to do comparative methods in R
  ☆20Updated last year
• FePhyFoFum / PyPHLAWD
  Python version of PHLAWD
  ☆21Updated last week
• fkeck / bioseq
  A Toolbox for Manipulating Biological Sequences in R
  ☆20Updated 2 years ago
• mblstamps / stamps2019
  Materials for the STAMPS 2019 course at the MBL in Woods Hole, MA, USA
  ☆35Updated 5 years ago
• danlwarren / Evolution-2019-Phylogenetic-Methods-Workshop
  This repo contains tutorials and data for the workshop on phylogenetic methods being delivered at the 2019 Evolution conference in Provid…
  ☆13Updated 5 years ago
• gbradburd / conStruct
  method for modeling continuous and discrete population genetic structure
  ☆35Updated 10 months ago
• liamrevell / learnPopGen
  initial commit
  ☆25Updated last year
• pasraia / RRphylo
  phylogenetic comparative method
  ☆10Updated 2 months ago
• pmartinezarbizu / pairwiseAdonis
  Pairwise multilevel comparison using adonis
  ☆69Updated last year
• viralemergence / virion
  An open database of vertebrate-virus interactions
  ☆37Updated last week
• mwpennell / geiger-v2
  A suite of methods and models for studying evolutionary radiations
  ☆22Updated last year