Analysis tools for SLEAP-based plant root phenotyping.
☆13Apr 10, 2026Updated last week
Alternatives and similar repositories for sleap-roots
Users that are interested in sleap-roots are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- NWB extension to store pose estimation data☆17Feb 27, 2026Updated last month
- Tools for machine learning of animal behavior☆15Mar 8, 2024Updated 2 years ago
- A Robust Leaf Surface Reconstruction Method for 3D Plant Phenotyping☆20Dec 12, 2023Updated 2 years ago
- In-Field Phenotyping Based on Crop Leaf and Plant Instance Segmentation☆21Jul 14, 2023Updated 2 years ago
- In silico plant phenotyping environment☆22Mar 11, 2023Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- High Precision Leaf Instance Segmentation for Phenotyping in Point Clouds Obtained Under Real Field Conditions☆24Dec 5, 2023Updated 2 years ago
- In-Field Phenotyping Based on Crop Leaf and Plant Instance Segmentation☆23Aug 3, 2021Updated 4 years ago
- Source code for SegRoot☆18Jul 19, 2019Updated 6 years ago
- Implementation of Sorghum 3D reconstruction and skeletonization.☆13May 26, 2022Updated 3 years ago
- ☆11May 20, 2025Updated 10 months ago
- PointCloud analysis focus on solving 3D plant phenotypes☆46May 15, 2024Updated last year
- Minimum Information About a Plant Phenotyping Experiment☆39Jan 7, 2026Updated 3 months ago
- 这是一个基于AIot技术的智能育种箱,集成了温湿度、光照、浇灌、气体等一系列环境参数的监控和控制功能。☆12Mar 8, 2025Updated last year
- Plant Phenotyping APP☆49Oct 15, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Open-PhenoLiDAR is an open-source package from the integration of LiDAR sensors in plant phenotyping and crop monitoring applications.☆54Apr 24, 2022Updated 3 years ago
- Software to accompany plant stress phenotyping dataset and analysis papers☆10Feb 14, 2019Updated 7 years ago
- An explainable Deep Machine Vision framework for Plant Stress Phenotyping☆15Jun 29, 2021Updated 4 years ago
- Dataloader for applying sequence models to personalized genomics☆29Updated this week
- RootPainter: Deep Learning Segmentation of Biological Images with Corrective Annotation☆76Updated this week
- Corn Point Cloud Deformation Tool☆14Dec 18, 2025Updated 4 months ago
- Source files for the SmartRoot software. Website: https://smartroot.github.io/☆16Jun 28, 2022Updated 3 years ago
- Re-usable GitHub Action scripts☆14Updated this week
- ☆13Aug 12, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Easy Plant Phenotyping Tool for both indoor and outdoor use.☆12Jun 4, 2020Updated 5 years ago
- 3D GWAS across multiple phenotypes☆13Oct 11, 2022Updated 3 years ago
- Implementation of the 3D reconstruction pipeline optimized for plant branching structures.☆18Feb 24, 2025Updated last year
- Deep Learning segmentation suite designed for 2D microscopy image segmentation☆10Dec 17, 2021Updated 4 years ago
- This reop contains the dataset of strawberries picking pint, ripeness and weight annotations.☆11May 12, 2023Updated 2 years ago
- 🕶️ A list of third party FarmBot software projects.☆20Oct 29, 2021Updated 4 years ago
- Plant 3D (P3D): A plant phenotyping toolkit for 3D point clouds☆61Jan 30, 2020Updated 6 years ago
- Pyranges: a Python framework for ultrafast sequence interval operations☆53Updated this week
- Open-source software for analyzing hyperspectral images and other sets of plant phenotyping data.☆15May 19, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- 整理農業開放資料相關資源與專案☆15Aug 10, 2020Updated 5 years ago
- ☆15Nov 16, 2023Updated 2 years ago
- ☆13May 27, 2025Updated 10 months ago
- 3-day workshop to teach biologists how to train and process deep convolutional neural networks for image segmentation through a comprehen…☆12May 30, 2022Updated 3 years ago
- ☆12May 6, 2024Updated last year
- This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.☆15Jul 25, 2023Updated 2 years ago
- Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/☆11Mar 13, 2023Updated 3 years ago