neurodata / CloudRegLinks
CloudReg
☆11Updated last year
Alternatives and similar repositories for CloudReg
Users that are interested in CloudReg are comparing it to the libraries listed below
Sorting:
- Standalone cellfinder cell detection algorithm☆20Updated last year
- Loading and saving of image data.☆10Updated last year
- A python toolbox for locating and exporting brain regions from mouse brain images.☆12Updated last year
- Registration to BrainGlobe atlases in napari using Elastix☆24Updated 2 weeks ago
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- Brainways☆21Updated 2 months ago
- How to use Aligning Big Brains and Atlases with Python☆14Updated 2 years ago
- Read and write files from the BrainGlobe neuroanatomy suite☆15Updated 2 weeks ago
- ☆18Updated 3 years ago
- Automated 3D brain registration with support for multiple species and atlases.☆138Updated 2 weeks ago
- Tools for distributed alignment of massive images☆89Updated 2 months ago
- Segmentation of anatomical structures in a common coordinate space☆34Updated 2 weeks ago
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆36Updated last year
- A plugin that enables image segmentation provided by Allen Institute for Cell Science☆17Updated this week
- ☆18Updated 3 years ago
- 3-D imaging visualisation through slicing☆31Updated 10 months ago
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆54Updated last week
- ☆45Updated 5 years ago
- ☆23Updated 2 months ago
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆22Updated 2 weeks ago
- Efficient cell detection in large images using cellfinder in napari☆22Updated last year
- Fiji pipeline for automated serial section reconstruction and mouse brain analysis.☆29Updated 2 years ago
- A visualization app for 3D-registered data processed in ABBA and QuPath☆20Updated 3 years ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆46Updated 2 weeks ago
- GPU-based 3D non-rigid volumetric registration☆41Updated 2 months ago
- Visualise brainreg registration output☆10Updated 3 years ago
- brainglobe.info website☆11Updated this week
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11Updated 4 years ago
- UNRAVEL: UN-biased high-Resolution Analysis and Validation of Ensembles using Light sheet images☆13Updated this week
- Automated 3D brain registration in napari with support for multiple species and atlases.☆16Updated last year