Multi-Scale Integrated Cell
☆36Aug 11, 2022Updated 3 years ago
Alternatives and similar repositories for MuSIC
Users that are interested in MuSIC are comparing it to the libraries listed below
Sorting:
- CliXO algorithm re-implemented☆16Nov 9, 2021Updated 4 years ago
- ☆16Dec 3, 2025Updated 3 months ago
- Causal inference, differential expression, and co-expression for scRNA-seq☆19Dec 19, 2025Updated 3 months ago
- Toolkit for constructing, analyzing, and visualizing data-driven ontologies☆17Feb 10, 2023Updated 3 years ago
- MERFISH decoding software☆26Aug 16, 2025Updated 7 months ago
- CellDrift: temporal perturbation effects for single cell data☆13Dec 3, 2022Updated 3 years ago
- development of network co-localization tool☆14Mar 2, 2026Updated 2 weeks ago
- CellBox: Interpretable Machine Learning for Perturbation Biology☆56Jul 27, 2023Updated 2 years ago
- ☆24Jul 29, 2025Updated 7 months ago
- ☆19Mar 21, 2024Updated 2 years ago
- Tutorials for Squidpy☆34Dec 18, 2025Updated 3 months ago
- Interpretable splicing model☆23Jun 14, 2023Updated 2 years ago
- the server backend for ml-dash☆10Apr 21, 2025Updated 11 months ago
- Dynamic Flux Balance analysis in Python☆11Jan 22, 2016Updated 10 years ago
- Construction, quantification, and visualization of proteoform families☆14Dec 16, 2024Updated last year
- ☆17Jul 30, 2024Updated last year
- Collection of Sphinx extensions similar to (but more flexible than) numpydoc☆12Updated this week
- CHAMMI: A benchmark for channel-adaptive models in microscopy imaging☆14Oct 23, 2024Updated last year
- Fast Inference of Networks from Directed Regulations☆22Dec 7, 2023Updated 2 years ago
- R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis☆32Mar 4, 2026Updated 2 weeks ago
- DYNamics Agnostic Network MOdels☆18Jul 3, 2018Updated 7 years ago
- an R wrapper for the Gnu Scientific Library☆18Jan 13, 2026Updated 2 months ago
- PAthway Representation and Analysis by Direct Inference on Graphical Models☆46Feb 7, 2018Updated 8 years ago
- Library for mass spectrometry projects☆27Mar 6, 2026Updated 2 weeks ago
- HiGlass track for displaying arcs between disconnected regions☆10Dec 13, 2022Updated 3 years ago
- JSON Schema validation for JSON-LD files using Schema.org vocabulary.☆23Dec 1, 2022Updated 3 years ago
- Minimal Viable Identifier☆14Jan 21, 2022Updated 4 years ago
- openASO is a project designed to identify regulatory regions of an RNA that can be targeted by antisense oligonucleotides.☆11Sep 30, 2021Updated 4 years ago
- ☆13Sep 30, 2023Updated 2 years ago
- R package for proximity-based methods of link prediction.☆12Aug 11, 2025Updated 7 months ago
- Interactive and integrated analysis of multiplexed tissue microarrays☆14Mar 9, 2026Updated last week
- Phylogenetic pathway–dependent recognition of fixed substitutions and parallel mutations☆11Sep 18, 2025Updated 6 months ago
- ☆39Jul 3, 2025Updated 8 months ago
- ☆20Aug 28, 2022Updated 3 years ago
- Feature-rich Python implementation of the tximport package for gene count estimation.☆43Mar 12, 2026Updated last week
- An online database of variants functionally demonstrated to affect (or not affect) splicing.☆11Mar 20, 2025Updated last year
- Ultra-efficient and sensitive method to search for Open Reading Frames in spliced genomes guided by reference annotation to maximize prot…☆43Dec 30, 2025Updated 2 months ago
- VEGA: VAE Enhanced by Gene Annotations☆17May 5, 2022Updated 3 years ago
- Profile for provenance research object of a CWL workflow run☆19Dec 20, 2022Updated 3 years ago