bioimage-io / bioimageio-chatbot
Your Personal Assistant in Computational Bioimaging.
☆38Updated 2 weeks ago
Alternatives and similar repositories for bioimageio-chatbot:
Users that are interested in bioimageio-chatbot are comparing it to the libraries listed below
- An Interactive Image Segmentation Filter for Multiplex Microscopy☆28Updated 2 weeks ago
- Guides and code for 3D nuclear instance segmentation☆20Updated last month
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆52Updated 3 months ago
- Supporting data files, documentation, and updated tips for the Cell Painting protocol☆21Updated 3 years ago
- A platform for compiling, analyzing, and exploring tracking data☆43Updated last month
- An introduction to bioimage analysis - http://bioimagebook.github.io☆65Updated 6 months ago
- ☆38Updated 6 months ago
- Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy☆37Updated 3 months ago
- ☆59Updated this week
- CellProfiler tutorial pipelines and images☆90Updated 3 months ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆41Updated 3 months ago
- ☆20Updated 10 months ago
- Self-supervised models for encoding protein localization patterns from microscopy images☆75Updated 5 months ago
- ☆30Updated last year
- ☆141Updated 2 weeks ago
- Piecewise alignment for layers of mosaics☆23Updated 2 months ago
- Predicting Cell Health with Morphological Profiles☆36Updated 3 years ago
- Cloud-based data annotation tools for biological images☆77Updated last year
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆74Updated 3 weeks ago
- Microsopic Image Analyzer (MIA)☆29Updated 10 months ago
- computer vision models for single-cell phenotyping☆42Updated this week
- Toolbox for the analysis of smFISH images.☆59Updated last year
- StarDist plugin for napari☆37Updated 5 months ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated 2 months ago
- Optimizing the Cell Painting assay for image-based profiling☆19Updated last month
- ☆31Updated 2 years ago
- ☆15Updated 6 months ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆43Updated last year
- Codebase for "A Foundation Model for Cell Segmentation"☆70Updated this week
- Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications☆50Updated 11 months ago