dmlond / docker_bwa_aligner
Docker containers that demonstrate a proof of concept bwa alignment workflow
☆14Updated 10 years ago
Alternatives and similar repositories for docker_bwa_aligner:
Users that are interested in docker_bwa_aligner are comparing it to the libraries listed below
- ☆12Updated 8 years ago
- Docker images of bioinformatics software☆21Updated 7 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 5 years ago
- Color DNA/RNA bases in terminal output☆20Updated 7 years ago
- A Python library to work with high-throughput sequencing data in the context of data integration☆14Updated 7 years ago
- Image and VM management for Jenkins, Spark and Mesos clusters in EC2☆22Updated 4 years ago
- Flexible omics pipeline☆18Updated 8 months ago
- robust matching of small variant datasets using flexible scoring schemes☆10Updated 4 years ago
- Online material and code base for the article Coordinates and Intervals in Graph Based Reference Genomes☆11Updated 7 years ago
- Lightweight workflows in bioinformatics:☆24Updated 10 years ago
- A tool for running bioinformatics workflows locally or in the cloud.☆30Updated 5 years ago
- Trigger the Google Genomics Pipeline API with CWL☆11Updated 8 years ago
- X things you should take into consideration if you code for big data analysis☆23Updated 6 years ago
- Parallel Recipes : parallel workflow execution made easy☆13Updated 9 years ago
- Directly create a bigwig file with signal derived from a sorted and indexed bam file.☆11Updated 7 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- Import and run CWL workflows on DNAnexus (alpha)☆13Updated 6 years ago
- GenoTypes Compressor☆15Updated 2 years ago
- python stuff I use☆19Updated 5 years ago
- normalize, left-align, trim, validate and clean VCF files☆20Updated 9 years ago
- reference free variant assembly☆33Updated last year
- [Bio in Docker] Symposium 2015☆21Updated 7 years ago
- Quick Read Quality Control☆20Updated 2 years ago
- ☆18Updated 6 years ago
- Library for visualising genomic features in Python.☆15Updated 7 years ago
- What's The Function of these genes?☆22Updated 8 years ago
- An integrated high performance bioinformatics toolkit☆23Updated 5 years ago
- A server for maintaining high-throughput sequencing QC data☆13Updated last year
- Python client for GA4GH htsget protocol☆15Updated 2 years ago
- BioDSL (pronounced Biodiesel) is a Domain Specific Language for creating bioinformatic analysis workflows.☆16Updated 6 years ago