Alternatives and similar repositories for docker_bwa_aligner

Users that are interested in docker_bwa_aligner are comparing it to the libraries listed below

• blachlylab / mucor
  ☆12Updated 8 years ago
• bmeg / funnel-client
  Trigger the Google Genomics Pipeline API with CWL
  ☆11Updated 8 years ago
• tseemann / homebrew-bioinformatics-linux
  Homebrew formulae for bioinformatics software only available for Linux
  ☆27Updated 6 years ago
• brentp / toolshed
  python stuff I use
  ☆19Updated 5 years ago
• koelling / dnacol
  Color DNA/RNA bases in terminal output
  ☆21Updated 8 years ago
• roryk / bcbio.rnaseq
  Mostly deprecated in favor of : https://github.com/hbc/bcbioRNASeq. Quality control, differential gene/transcript expression and pathway …
  ☆24Updated 7 years ago
• bartongroup / AlmostSignificant
  A server for maintaining high-throughput sequencing QC data
  ☆13Updated 2 months ago
• sjackman / docker-bio
  Docker images of bioinformatics software
  ☆21Updated 8 years ago
• PanosFirmpas / bamToBigWig
  Directly create a bigwig file with signal derived from a sorted and indexed bam file.
  ☆11Updated 8 years ago
• BenLangmead / qtip
  Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities
  ☆25Updated 5 years ago
• biobuilds / biobuilds
  Curated collection of open-source bioinformatics tools
  ☆28Updated 6 years ago
• sjackman / uniqtag
  Abbreviate strings to short, unique identifiers
  ☆24Updated 3 years ago
• xguse / blacktie
  Blacktie: a streamlined interface to the popular tophat/cufflinks RNA-seq pipeline
  ☆26Updated 10 years ago
• evoldoers / wtfgenes
  What's The Function of these genes?
  ☆22Updated 8 years ago
• dnanexus-archive / dx-cwl
  Import and run CWL workflows on DNAnexus (alpha)
  ☆13Updated 7 years ago
• your-highness / normR
  Normalization and difference calling for Next Generation Sequencing (NGS) data via joint multinomial modeling.
  ☆11Updated 4 years ago
• BD2KGenomics / cgcloud
  Image and VM management for Jenkins, Spark and Mesos clusters in EC2
  ☆22Updated 5 years ago
• nickloman / massive-nanopore-silliness
  Very very long reads, indeed
  ☆13Updated 8 years ago
• arq5x / ggd
  ☆43Updated 9 years ago
• epruesse / ymp
  Flexible omics pipeline
  ☆17Updated this week
• YeoLab / qtools
  qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python
  ☆21Updated 2 years ago
• uio-cels / genomicgraphcoords
  Online material and code base for the article Coordinates and Intervals in Graph Based Reference Genomes
  ☆11Updated 8 years ago
• ryanlayer / svv
  Stupid Simple Structural Variant View
  ☆25Updated 8 years ago
• NCBI-Hackathons / Pharmacogenomics_Prediction_Pipeline_P3
  ☆28Updated 7 years ago
• ma-compbio / Weaver
  Allele-Specific Quantification of Structural Variations in Cancer Genomes
  ☆18Updated 6 years ago
• bede / tictax
  Streaming sequence classification with web services ✓📌
  ☆19Updated 2 years ago
• openvax / varlens
  commandline manipulation of genomic variants and NGS reads
  ☆19Updated last year
• DecodeGenetics / BamHash
  ☆36Updated 5 years ago
• yunwilliamyu / quartz
  ☆15Updated 9 years ago
• daler / hubward
  Manage the visualization of large amounts of other people's [often messy] genomics data
  ☆18Updated 9 years ago