Novartis / ontobrowserLinks
OntoBrowser is a web-based application for managing ontologies
☆41Updated 2 years ago
Alternatives and similar repositories for ontobrowser
Users that are interested in ontobrowser are comparing it to the libraries listed below
Sorting:
- First pass at a thin wrapper around the Monarch API and ChatGPT plugin☆12Updated 2 months ago
- 📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures☆69Updated this week
- Grounding of biomedical named entities with contextual disambiguation☆44Updated 3 weeks ago
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆54Updated last month
- The symptom ontology was designed around the guiding concept of a symptom being: “A perceived change in function, sensation or appearance…☆41Updated last year
- Version 4 of the EMBL-EBI Ontology Lookup Service (OLS)☆63Updated this week
- OHDSI Ananke - A Tool for Mapping Between OHDSI Concept Identifiers to Unified Medical Language System (UMLS) identifiers☆14Updated 4 years ago
- Medical action ontology☆56Updated this week
- Map your disease and phenotype terms to the Open Targets platform ontology☆21Updated 6 months ago
- a tool for mapping free-text descriptions of entities to ontology terms☆21Updated 10 months ago
- NetworkX-based Python library for representing ontologies☆90Updated last year
- DEPRECATED: replaced by linkml☆23Updated 4 years ago
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆88Updated last year
- Data ingest application for Monarch Initiative knowledge graph using Koza☆17Updated last week
- Integrated OBO ontology store☆46Updated 3 weeks ago
- A collection of useful python functions for looking up information and working with the Biolink Model☆24Updated last week
- Transform the OMOP model to graph model☆22Updated 5 months ago
- 🍇 Embiggen is the Python Graph Representation learning, Prediction and Evaluation submodule of the GRAPE library.☆42Updated last year
- An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…☆43Updated last year
- An instance of KG Hub to produce a knowledge graph for COVID-19 response.☆81Updated last year
- A tutorial for the ROBOT command line tool.☆16Updated 2 years ago
- LLM-driven curation assist tool☆87Updated 3 weeks ago
- LLM retrieval augmented generation agent for the Monarch Knowledge graph.☆23Updated this week
- NCATS Biomedical Translator Reasoners Standard API☆36Updated this week
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub☆32Updated last year
- Github repo for the Experimental Factor Ontology (EFO)☆56Updated 2 weeks ago
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆40Updated last year
- Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)☆41Updated last month
- ☆24Updated 4 years ago
- Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)☆35Updated this week