NatPRoach / c_elegans_dRNAseq_analysisLinks
Scripts used in the analysis of C elegans dRNAseq data
☆14Updated last year
Alternatives and similar repositories for c_elegans_dRNAseq_analysis
Users that are interested in c_elegans_dRNAseq_analysis are comparing it to the libraries listed below
Sorting:
- Two pass alignment for long reads☆22Updated 4 years ago
- Long read to rMATS☆32Updated 2 years ago
- Structural variant VCF annotation, duplicate removal and comparison☆35Updated 3 months ago
- ☆20Updated 3 years ago
- ☆21Updated last year
- Long-read splice alignment with high accuracy☆64Updated last year
- alternative splicing analysis pipeline☆20Updated 4 years ago
- SpliceWiz is an R package for exploring differential alternative splicing events in splice-aware alignment BAM files.☆21Updated 2 months ago
- Workflow for Sequenza, cellularity and ploidy☆26Updated 5 months ago
- ☆38Updated 2 years ago
- ☆31Updated last year
- Reconstructs complex variation using Bionano optical mapping data and breakpoint graph data☆19Updated 2 years ago
- Workflow for Nanopore Sequencing of 10x single cell libraries☆19Updated 10 months ago
- ☆34Updated 2 months ago
- Version II of Mandalorion☆32Updated 7 years ago
- isoCirc☆10Updated 2 years ago
- An analysis pipeline for Nanopore direct-RNA sequencing☆13Updated 6 months ago
- Integrating long read sequencing enhances short read-based locus-specific transposable element quantification☆10Updated 8 months ago
- ☆17Updated last year
- Splice junction analysis and filtering from BAM files☆42Updated 3 years ago
- ☆38Updated last year
- Immuological gene typing and annotation for genome assembly☆38Updated 10 months ago
- ☆23Updated 6 months ago
- nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis☆20Updated 3 years ago
- Alternative polyadenylation detection from diverse data sources such as 3'-seq, long-read and short-reads.☆34Updated 2 years ago
- Long-read Isoform Quantification and Analysis☆38Updated 10 months ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆37Updated last year
- ☆24Updated last year
- TEMP is a software package for detecting transposable elements (TEs) insertions and excisions from pooled high-throughput sequencing dat…☆22Updated 8 years ago
- A command line tool to compute mapping statistics from a BAM file☆25Updated 3 years ago