churchlandlab / WidefieldImagerLinks
Pre-processing pipeline for widefield data
☆11Updated 4 years ago
Alternatives and similar repositories for WidefieldImager
Users that are interested in WidefieldImager are comparing it to the libraries listed below
Sorting:
- spike extraction from calcium signals (Deneux et al., 2016)☆30Updated 5 years ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆49Updated last year
- Serial-section automated anatomy extension for ScanImage☆14Updated 2 weeks ago
- Match suite2p ROIs between imaging sessions☆25Updated 6 years ago
- Tools to process widefield data☆12Updated 3 years ago
- Control and design of two-photon photostimulation experiments☆16Updated last year
- For displaying spherically corrected visual stimulus on a flat screen.☆9Updated 5 months ago
- Tools to register histological section images and cell count locations to mouse brain atlas☆27Updated 3 years ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆89Updated 7 months ago
- Image processing and tools for widefield imaging☆18Updated 5 years ago
- ☆38Updated 3 years ago
- motion correction☆17Updated 2 years ago
- pipeline for volumetric cell segmentation☆12Updated last week
- Extract regions of interest based on correlated pixel intensity☆24Updated 8 years ago
- Bonsai package for controlling headborne, calcium imaging miniscopes☆12Updated last year
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆60Updated last year
- Tools to process widefield data☆17Updated last month
- Pytorch implementation of LocaNMF☆36Updated 5 years ago
- miniscope analysis pipeline with interactive visualizations☆93Updated 11 months ago
- ☆21Updated this week
- Fiber photometry analysis☆22Updated 2 months ago
- Open Neurophysiology Environment☆19Updated this week
- Region Of Interest Classification and Tracking☆19Updated this week
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆35Updated last week
- pyqt5 dependent applications for IBL sessions☆27Updated last week
- ☆17Updated 2 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.