agiovann / CalBlitzLinks
Blazing fast calcium imaging analysis toolbox
☆22Updated 7 years ago
Alternatives and similar repositories for CalBlitz
Users that are interested in CalBlitz are comparing it to the libraries listed below
Sorting:
- motion correction☆17Updated 2 years ago
- Computational toolbox for analysis of calcium imaging data of neuronal populations☆33Updated last year
- Extract regions of interest based on correlated pixel intensity☆24Updated 8 years ago
- miniscope analysis pipeline with interactive visualizations☆93Updated 10 months ago
- spike extraction from calcium signals (Deneux et al., 2016)☆30Updated 5 years ago
- Match suite2p ROIs between imaging sessions☆25Updated 6 years ago
- Pytorch implementation of LocaNMF☆36Updated 5 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- Tools for processing 2P recordings☆125Updated last year
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆53Updated last year
- ☆36Updated 3 years ago
- Deconvolution of calcium imaging data☆95Updated 4 months ago
- Region Of Interest Classification and Tracking☆19Updated this week
- Single photon tools for Neuroscience☆35Updated last year
- IaC codebase for the NeuroCAAS Platform☆37Updated last year
- Registration of cells across sessions.☆75Updated 9 months ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆49Updated last year
- ☆34Updated 2 weeks ago
- Python package for analysis of dynamic fluorescence microscopy data☆100Updated 6 years ago
- Functions to assess quality of spike sorting results☆33Updated last year
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆34Updated 2 months ago
- Histology processing☆65Updated last month
- A GUI and library for doing multi-fiber photometry☆18Updated 7 years ago
- pipeline for volumetric cell segmentation☆12Updated 2 months ago
- Browser-based NWB visualization and DANDI exploration☆57Updated 2 weeks ago
- Compression, denoising and demixing of functional imaging recordings☆28Updated 6 years ago
- pyqt5 dependent applications for IBL sessions☆27Updated last week
- Files and instructions for manufacturing NP1.0, NP2.0alpha, and NP2.0 Neuropixels chronic recording fixtures.☆19Updated this week
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆89Updated 6 months ago
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆66Updated last week