BrainCOGS / MicroscopeLinks
Design and documentation for the 2p microscope.
☆16Updated 11 months ago
Alternatives and similar repositories for Microscope
Users that are interested in Microscope are comparing it to the libraries listed below
Sorting:
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆13Updated 2 months ago
- User-affordable and versatile light-sheet microscopy system for cleared specimens☆27Updated 10 months ago
- Hardware documentation for the mesoSPIM microscope project☆34Updated 5 months ago
- Accurate denoising of voltage imaging data through statistically unbiased prediction, Nature Methods.☆98Updated 5 months ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆57Updated 2 years ago
- Config and scripts used to run a Nikon Eclipse Ti in the vanNimwegen lab.☆22Updated last year
- Python control of micro-manager for customized data acquisition☆178Updated 5 months ago
- Calcium Data Extraction and Analysis☆49Updated 3 years ago
- Open-source diode laser combiner, fiber launch, and sequencing controller for fluorescence microscopy☆53Updated 5 years ago
- Denoising and Demixing Pipeline for in vivo Voltage Imaging Data (SGPMD-NMF)☆15Updated 2 years ago
- ☆17Updated 2 years ago
- The framework for quantification of neuronal anatomy☆55Updated this week
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆55Updated last year
- Image acquisition software for mesoSPIM light-sheet microscopes.☆45Updated this week
- Recipes for open microscopy☆12Updated 5 years ago
- ☆34Updated 8 months ago
- Serial-section automated anatomy extension for ScanImage☆17Updated last week
- Non-comprehensive list of projects and resources related to open microscopy.☆150Updated 3 months ago
- spike extraction from calcium signals (Deneux et al., 2016)☆34Updated 5 years ago
- Laser scanning microscope acquisition software☆18Updated 11 months ago
- Compression, denoising and demixing of functional imaging recordings☆28Updated 7 years ago
- GUI interface between napari and micromanager powered by pymmcore-plus and pymmcore-widgets☆74Updated 3 weeks ago
- MSSR Plugin☆14Updated last year
- motion correction☆17Updated 3 years ago
- Flow-Registration toolbox for 2P motion compensation☆27Updated 4 months ago
- ☆41Updated 4 years ago
- Parts list and build instructions for our high-numerical-aperture lightsheet. Read the publication here: https://andrewgyork.github.io/hi…☆22Updated last year
- The python-microscopy environment - an open-source package for light microscopy☆96Updated 3 weeks ago
- Control and design of two-photon photostimulation experiments☆17Updated 2 years ago
- Matlab routines for online non-rigid motion correction of calcium imaging data☆153Updated 3 years ago