BrainCOGS / MicroscopeLinks
Design and documentation for the 2p microscope.
☆15Updated 6 months ago
Alternatives and similar repositories for Microscope
Users that are interested in Microscope are comparing it to the libraries listed below
Sorting:
- Accurate denoising of voltage imaging data through statistically unbiased prediction, Nature Methods.☆85Updated last month
- Hardware documentation for the mesoSPIM microscope project☆34Updated 3 weeks ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆52Updated 2 years ago
- User-affordable and versatile light-sheet microscopy system for cleared specimens☆25Updated 6 months ago
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆13Updated this week
- Config and scripts used to run a Nikon Eclipse Ti in the vanNimwegen lab.☆22Updated last year
- MSSR Plugin☆14Updated 10 months ago
- motion correction☆17Updated 2 years ago
- Automatic Correction for sCMOS-related Noise☆18Updated 3 years ago
- Python control of micro-manager for customized data acquisition☆173Updated 3 weeks ago
- Calcium Data Extraction and Analysis☆45Updated 2 years ago
- Serial-section automated anatomy extension for ScanImage☆15Updated last month
- Image acquisition software for mesoSPIM light-sheet microscopes.☆43Updated last week
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆54Updated last year
- Adaptive Optics plugin for MicroManager☆12Updated 3 years ago
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆50Updated last year
- A napari plugin to analysis point spread functions.☆13Updated 5 months ago
- Handmade ImageJ / Fiji LUTs for microscopy, scientific good visualization and art.☆12Updated 8 months ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆42Updated 10 months ago
- ☆34Updated 4 months ago
- Recipes for open microscopy☆12Updated 4 years ago
- ☆40Updated 3 years ago
- Denoising and Demixing Pipeline for in vivo Voltage Imaging Data (SGPMD-NMF)☆15Updated 2 years ago
- An interactive image processing program for biologists written in Python.☆23Updated 2 weeks ago
- Open-source diode laser combiner, fiber launch, and sequencing controller for fluorescence microscopy☆53Updated 4 years ago
- GUI interface between napari and micromanager powered by pymmcore-plus and pymmcore-widgets☆71Updated last week
- GPU accelerated beam propagation tools for biological light tissue simulations☆37Updated 6 years ago
- Compression, denoising and demixing of functional imaging recordings☆28Updated 7 years ago
- Seeded Iterative Demixing (SID) of neuronal activity recordings made using Light Field Microscopy (LFM)☆28Updated 5 years ago
- Matlab routines for online non-rigid motion correction of calcium imaging data☆152Updated 3 years ago