carpentries-incubator / ml4bio-workshop
Materials for a workshop introducing machine learning to biologists
☆21Updated 2 weeks ago
Alternatives and similar repositories for ml4bio-workshop:
Users that are interested in ml4bio-workshop are comparing it to the libraries listed below
- A graphical interface for sklearn classification to introduce machine learning to biologists☆11Updated 2 years ago
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆33Updated last week
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19Updated 9 months ago
- Making bioinformatics fun again☆65Updated 9 months ago
- A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.☆44Updated 2 years ago
- Just a collection of (often poor) scripts to do various bits of bioinformatics stuff I find myself needing to do.☆59Updated 4 years ago
- Sphinx documentation source for a computational genomics tutorial.☆33Updated 4 years ago
- ☆25Updated 3 months ago
- viGEN - A bioinformatics pipeline for the exploration of viral RNA in human NGS data☆27Updated 5 months ago
- IPAW: a Nextflow workflow for proteogenomics☆27Updated 7 months ago
- A template repository for Snakemake pipepline(s) and a python command-line toolkit.☆28Updated this week
- ☆30Updated 4 years ago
- Webpage of the "Introduction to RNA-Seq: From quality control to pathway analysis - streamed" SIB course.☆14Updated 5 months ago
- ☆19Updated 2 years ago
- Variant catalogue pipeline☆25Updated last month
- EditR: an algorithm for simple and cost effective measurement of base editing by quantifying Sanger trace fluorescence☆32Updated last year
- A Practical Introduction to Reproducible Computational Workflows (ISMB/ECCB 2019 Tutorial AM4)☆33Updated 5 years ago
- Robust, tested workflows for RNA-seq, ChIP-seq and other high-throughput sequencing analysis☆21Updated last month
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆49Updated 5 years ago
- ☆64Updated 2 months ago
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆20Updated last year
- A set of Shiny apps to provide interactive enrichment analysis and exploration of results.☆28Updated 3 weeks ago
- An adaptable Snakemake workflow which uses GATKs best practice recommendations to perform germline mutation calling starting with BAM fil…☆11Updated 3 years ago
- A tutorial on how to create bioinformatics pipelines as bash scripts, Makefiles and using tools like Nextflow.☆15Updated 2 years ago
- Re-analysis of data provided by Gihawi et al. 2023 bioRxiv☆26Updated last year
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆41Updated 10 months ago
- Galaxy RNA workbench☆39Updated 4 years ago
- Workflow management with Nextflow and nf-core☆25Updated last month
- ☆26Updated last week
- ☆18Updated last year