Alternatives and similar repositories for fusera

Users that are interested in fusera are comparing it to the libraries listed below

• statgen / EPACTS
  ☆37Updated 3 years ago
• cancerit / cgpPindel
  Cancer Genome Project Insertion/Deletion detection pipeline based around Pindel
  ☆28Updated 6 months ago
• cancerit / CaVEMan
  SNV expectation maximisation based mutation calling algorithm aimed at detecting somatic mutations in paired (tumour/normal) cancer sampl…
  ☆63Updated 6 months ago
• UW-GAC / analysis_pipeline
  TOPMed analysis pipeline
  ☆52Updated 2 years ago
• ScaleBio / ScaleRna
  ScaleBio Single-cell RNA Nextflow Workflow
  ☆38Updated 4 months ago
• davidliwei / rnaseqmut
  RNA-Seq Mutation Detection
  ☆28Updated 4 years ago
• freeseek / mocha
  MOsaic CHromosomal Alterations (MoChA) caller
  ☆88Updated 3 months ago
• KCCG / mity
  mity: A highly sensitive mitochondrial variant analysis pipeline for whole genome sequencing data
  ☆39Updated 2 months ago
• Ensembl / ensembl-variation
  The Ensembl Variation Perl API and SQL schema
  ☆30Updated 2 weeks ago
• talkowski-lab / SV-Adjudicator
  ☆25Updated 7 years ago
• cancerit / alleleCount
  Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each alle…
  ☆45Updated 3 years ago
• pmelsted / pizzly
  Fast fusion detection using kallisto
  ☆79Updated 5 months ago
• parklab / MosaicForecast
  A mosaic detecting software based on phasing and random forest
  ☆67Updated 2 years ago
• pachterlab / kma
  Keep Me Around: Intron Retention Detection
  ☆29Updated 6 years ago
• ChristofferFlensburg / superFreq
  Analysis pipeline for cancer sequencing data
  ☆111Updated 6 months ago
• cancerit / ClusterSV
  SV clustering
  ☆30Updated 4 years ago
• genome / genome
  Core modules used by the GMS
  ☆68Updated last year
• gogetdata / ggd-recipes
  conda recipes for genomic data
  ☆84Updated 4 years ago
• broadinstitute / gtex-viz
  GTEx Visualizations
  ☆65Updated 4 years ago
• igsr / 1000Genomes_data_indexes
  The index files for sequence and other data created for the 1000 Genomes project and the International Genome Sample Resource
  ☆47Updated 6 years ago
• BD2KGenomics / toil-scripts
  Toil workflows for common genomic pipelines
  ☆33Updated 6 years ago
• pachterlab / kallisto_paper_analysis
  Analysis from kallisto paper
  ☆32Updated 9 years ago
• ncbi / ngs
  NGS Language Bindings
  ☆119Updated last year
• vatlab / varianttools
  software tool for the manipulation, annotation, selection, and analysis of variants in the context of next-gen sequencing analysis
  ☆30Updated 3 years ago
• HaoKeLab / ensembleCNV
  ☆21Updated 4 years ago
• gt1 / biobambam
  Tools for bam file processing
  ☆55Updated 10 years ago
• CCDG / Pipeline-Standardization
  ☆82Updated 6 years ago
• hartleys / QoRTs
  Quality of RNA-Seq Toolset
  ☆53Updated 6 years ago
• gatk-workflows / gatk3-4-rnaseq-germline-snps-indels
  Workflows for processing RNA data for germline short variant discovery with GATK (v3+v4) and related tools
  ☆54Updated 5 years ago
• macarthur-lab / gnomad_browser
  gnomAD browser pre-ASHG 2018
  ☆33Updated 5 years ago