Alternatives and similar repositories for fusera:

Users that are interested in fusera are comparing it to the libraries listed below

• Ensembl / ensembl-variation
  The Ensembl Variation Perl API and SQL schema
  ☆28Updated this week
• vatlab / varianttools
  software tool for the manipulation, annotation, selection, and analysis of variants in the context of next-gen sequencing analysis
  ☆31Updated 3 years ago
• statgen / EPACTS
  ☆35Updated 3 years ago
• gogetdata / ggd-recipes
  conda recipes for genomic data
  ☆85Updated 3 years ago
• arq5x / grabix
  a wee tool for random access into BGZF files.
  ☆84Updated 6 years ago
• Nazeeefa / awesome-sequencing-tech-papers
  A collection of publications on comparison of high-throughput sequencing technologies.
  ☆27Updated 3 months ago
• pmelsted / pizzly
  Fast fusion detection using kallisto
  ☆80Updated 5 months ago
• UW-GAC / analysis_pipeline
  TOPMed analysis pipeline
  ☆52Updated last year
• brentp / rare-disease-wf
  (WIP) best-practices workflow for rare disease
  ☆60Updated 9 months ago
• CGGOxford / Opossum
  Opossum is a tool to pre-process RNA-seq reads prior to variant calling.
  ☆28Updated 6 years ago
• Illumina / Cyrius
  A tool to genotype CYP2D6 with WGS data
  ☆51Updated last year
• PapenfussLab / PathOS
  PathOS is a clinical application for filtering, analysing and reporting on NGS variants
  ☆28Updated 4 years ago
• dnanexus / dxCompiler
  WDL and CWL compiler for the DNAnexus platform
  ☆33Updated this week
• ekg / fastahack
  utilities for indexing and sequence extraction from FASTA files
  ☆59Updated 3 years ago
• ncbi / magicblast
  ☆36Updated 2 weeks ago
• statgen / gotcloud
  Genomes on the Cloud, Mapping & Variant Calling Pipelines
  ☆34Updated 8 years ago
• KCCG / mity
  mity: A highly sensitive mitochondrial variant analysis pipeline for whole genome sequencing data
  ☆36Updated this week
• cancerit / CaVEMan
  SNV expectation maximisation based mutation calling algorithm aimed at detecting somatic mutations in paired (tumour/normal) cancer sampl…
  ☆60Updated 5 months ago
• gatk-workflows / gatk3-4-rnaseq-germline-snps-indels
  Workflows for processing RNA data for germline short variant discovery with GATK (v3+v4) and related tools
  ☆51Updated 5 years ago
• cancerit / cgpPindel
  Cancer Genome Project Insertion/Deletion detection pipeline based around Pindel
  ☆28Updated 7 months ago
• pachterlab / kma
  Keep Me Around: Intron Retention Detection
  ☆29Updated 6 years ago
• bystrogenomics / bystro
  Natural Language Search and Analysis of High Dimensional Genomic Data
  ☆45Updated last week
• gt1 / biobambam
  Tools for bam file processing
  ☆55Updated 9 years ago
• BauerLab / ngsane
  Analysis Framework for Biological Data from High Throughput Experiments
  ☆34Updated 8 years ago
• Illumina / gvcfgenotyper
  A utility for merging and genotyping Illumina-style GVCFs.
  ☆33Updated 6 years ago
• ChristopherWilks / megadepth
  BigWig and BAM utilities
  ☆95Updated last year
• OpenGenomics / mc3
  ☆35Updated 4 years ago
• hartleys / QoRTs
  Quality of RNA-Seq Toolset
  ☆53Updated 6 years ago
• ambj / MuPeXI
  MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.
  ☆50Updated 5 years ago
• kdkorthauer / dmrseq
  R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing
  ☆58Updated 6 months ago