ngs-docs / 2016-adv-begin-shell-genomicsLinks
Workshop content for http://dib-training.readthedocs.org/en/pub/2016-01-13-adv-beg-shell.html
☆13Updated 7 years ago
Alternatives and similar repositories for 2016-adv-begin-shell-genomics
Users that are interested in 2016-adv-begin-shell-genomics are comparing it to the libraries listed below
Sorting:
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- The code for Daugherty, et al 2017 - Chromatin accessibility dynamics reveal novel functional enhancers in C. elegans☆11Updated 8 years ago
- Tutorials covering various topics in genomic data analysis.☆16Updated 7 years ago
- Analysis from kallisto paper☆32Updated 9 years ago
- Filters for false-positive mutation calls in NGS☆34Updated 6 years ago
- a set of NGS pipelines☆24Updated 2 weeks ago
- HOT regions paper☆11Updated 6 years ago
- Website for the precision medicine workshop☆45Updated last month
- Parse TF motifs from public databases, read into R, and scan using 'rtfbs'.☆23Updated 7 years ago
- GTEx analysis scripts☆20Updated 8 years ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated 2 years ago
- Tools to handle reads sequenced with unique molecular identifiers (UMIs).☆30Updated 8 years ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Updated 7 years ago
- DriverPower☆26Updated 10 months ago
- ☆23Updated last month
- A toolkit for working with ATAC-seq data.☆24Updated last year
- The Read Origin Protocol (ROP) is a computational protocol that aims to discover the source of all reads, including those originating fro…☆36Updated last year
- hands-on for NGS/SNParray CNV call trainning☆20Updated 3 years ago
- Student website repo for 2015/2016 Canadian Bioinformatics Workshops☆34Updated 2 years ago
- ☆33Updated 3 years ago
- ☆35Updated 9 years ago
- Differential ATAC-seq toolkit☆27Updated last year
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 11 years ago
- Bioinformatics analysis scripts, workflows, general code examples☆54Updated 4 years ago
- ☆17Updated 3 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆31Updated last year
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated 2 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)☆16Updated 13 years ago