Build and deploy Singularity containers to GitHub releases, and pull with the singularity-hpc client
☆17Oct 12, 2023Updated 2 years ago
Alternatives and similar repositories for singularity-deploy
Users that are interested in singularity-deploy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Provides syntax highlighting for Apptainer/Singularity definition files.☆10Dec 24, 2025Updated 5 months ago
- Local filesystem registry for containers (intended for HPC) using Lmod or Environment Modules. Works for users and admins.☆130Dec 13, 2025Updated 5 months ago
- Allele frequency filter app☆14May 4, 2022Updated 4 years ago
- Allele frequency filtering for Mendelian variant discovery☆18Sep 27, 2016Updated 9 years ago
- deploy a snakemake pipeline directly from version control (under development)☆25Jun 1, 2026Updated last week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- The code and analyses accompanying the manuscript “MetaMap: An atlas of metatranscriptomic reads in human disease-related RNA-seq data”.☆12Nov 28, 2018Updated 7 years ago
- ☆10Aug 29, 2012Updated 13 years ago
- Scripts for the analysis of TT-seq and DRB/TT-seq data.☆11Mar 11, 2020Updated 6 years ago
- Genomic Assemblies Merger for NGS☆26Nov 10, 2023Updated 2 years ago
- definition files and wrapper scripts used by NIH HPC staff to install user-facing apps on the Biowulf cluster☆35Mar 30, 2021Updated 5 years ago
- An ansible playbook to deploy a complete standalone neuroimaging workstation☆28Mar 27, 2026Updated 2 months ago
- Tools for querying and analysis of genomic data☆27Oct 26, 2025Updated 7 months ago
- ☆30Oct 4, 2024Updated last year
- A method for calculating single cell entropy and reconstructing cell differentiation lineage using single-cell RNA-seq data☆10May 26, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A command line program for large scale buffering between piped programs☆17Nov 19, 2021Updated 4 years ago
- Some examples of how to do some core things in Git☆10Apr 12, 2019Updated 7 years ago
- Set of files to use ROOTbooks in mybinder.org☆15Sep 22, 2020Updated 5 years ago
- Nextflow plugin implementation skeleton☆11Sep 1, 2025Updated 9 months ago
- ☆15Apr 2, 2025Updated last year
- examples of using Singularity containers for web-based products☆10Jan 2, 2018Updated 8 years ago
- Red: an intelligent, rapid, accurate tool for detecting repeats de-novo on the genomic scale.☆19Apr 24, 2024Updated 2 years ago
- This is the development Repository for CutLang☆12May 11, 2026Updated 3 weeks ago
- Sound Resynthesis with a Genetic Algorithm - my final year project from university☆11Jul 7, 2015Updated 10 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆11Oct 21, 2016Updated 9 years ago
- r-sem☆19Aug 8, 2018Updated 7 years ago
- Genome databases generation pipeline for ngs.plot and region_analysis.☆17Sep 8, 2015Updated 10 years ago
- Functional annotation pipeline for proteins from non-model organisms implemented in Nextflow☆20Feb 28, 2022Updated 4 years ago
- An Easy to Use Analysis System for All Human Public bulk RNAseq Data!☆19Dec 8, 2022Updated 3 years ago
- Phenotype detection in pooled genetic perturbation screens☆12Mar 13, 2024Updated 2 years ago
- Probabilistic HLA typing☆35Aug 31, 2019Updated 6 years ago
- Visualizing genetic sequence variation☆14Apr 27, 2020Updated 6 years ago
- A collection of perl scripts for NGS analysis☆17Oct 2, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Mantis Bug Tracking☆16Oct 2, 2023Updated 2 years ago
- RNA-Seq Unified Mapper☆27Sep 9, 2022Updated 3 years ago
- GitHub Action to add reviewer(s) to a pull request.☆12Apr 23, 2024Updated 2 years ago
- Python package and routines for merging VCF files☆29Apr 1, 2021Updated 5 years ago
- Work supporting the comparison of SnpEff and VEP effect prediction and HGVS identifiers☆11Mar 15, 2017Updated 9 years ago
- DensityMap is perl tool for the visualization of features density along chromosomes☆19May 12, 2022Updated 4 years ago
- ☆13Jul 22, 2025Updated 10 months ago