Build and deploy Singularity containers to GitHub releases, and pull with the singularity-hpc client
☆17Oct 12, 2023Updated 3 years ago
Alternatives and similar repositories for singularity-deploy
Users that are interested in singularity-deploy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Provides syntax highlighting for Apptainer/Singularity definition files.☆10Dec 24, 2025Updated 10 months ago
- Dockerfiles for FreeSurfer☆13Sep 10, 2026Updated last month
- The sars R package☆10Jan 6, 2026Updated 9 months ago
- Local filesystem registry for containers (intended for HPC) using Lmod or Environment Modules. Works for users and admins.☆134Dec 13, 2025Updated 10 months ago
- A tool for simulating CNVs for WES data. It simulates rearranged genome(s), short reads (fastq) and BAM file(s) automatically in one sing…☆17Feb 21, 2020Updated 6 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Allele frequency filter app☆14May 4, 2022Updated 4 years ago
- An example GitHub Action (CI) to build a Singularity container☆71Jun 7, 2023Updated 3 years ago
- Data portal client and server for NMDC.☆12Updated this week
- Allele frequency filtering for Mendelian variant discovery☆18Sep 27, 2016Updated 10 years ago
- annotating microbial co-occurrence networks☆12Oct 17, 2026Updated last week
- Scripts for the analysis of TT-seq and DRB/TT-seq data.☆11Mar 11, 2020Updated 6 years ago
- deploy a snakemake pipeline directly from version control (under development)☆28Oct 21, 2026Updated last week
- SPAGeDi: Spatial Pattern Analysis of Genetic Diversity☆10Nov 27, 2018Updated 7 years ago
- EnDED is a program that aims to detect environmentally-driven ("indirect") edges in an association network.☆10Dec 1, 2023Updated 2 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Gene Exploration System for Variance☆22Dec 8, 2022Updated 3 years ago
- CLI module for Invenio☆14Oct 14, 2026Updated 2 weeks ago
- Tools for querying and analysis of genomic data☆27Oct 26, 2025Updated last year
- definition files and wrapper scripts used by NIH HPC staff to install user-facing apps on the Biowulf cluster☆36Mar 30, 2021Updated 5 years ago
- ☆12Dec 28, 2021Updated 4 years ago
- Generate and process BAM files from Illumina sequencing instrument files☆23Feb 25, 2016Updated 10 years ago
- Automated processing of Sanger sequencing data, taxonomic profiling, and generation of microbial strain libraries☆19Jan 4, 2026Updated 9 months ago
- ☆30Oct 4, 2024Updated 2 years ago
- Motif Enrichment In Ranked Lists Of Peaks☆10Jun 17, 2021Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Set of files to use ROOTbooks in mybinder.org☆15Sep 22, 2020Updated 6 years ago
- Nextflow plugin implementation skeleton☆11Sep 1, 2025Updated last year
- Some examples of how to do some core things in Git☆10Apr 12, 2019Updated 7 years ago
- The various configs and tools we use on the GenomeDK cluster☆14Dec 8, 2015Updated 10 years ago
- Workshops for GlueX☆14Jul 2, 2026Updated 3 months ago
- A method for calculating single cell entropy and reconstructing cell differentiation lineage using single-cell RNA-seq data☆10May 26, 2023Updated 3 years ago
- Sound Resynthesis with a Genetic Algorithm - my final year project from university☆11Jul 7, 2015Updated 11 years ago
- IMa3☆13May 5, 2025Updated last year
- CoCoScore: context-aware co-occurrence scores for text mining applications☆20Mar 30, 2019Updated 7 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Snakemake pipeline for benchmarking cell-type deconvolution methods and deconvolving real bulk RNA-seq data with the use of scRNA-seq dat…☆16Apr 28, 2025Updated last year
- Dashboard to monitor and control services managed by monit across servers.☆14Oct 23, 2013Updated 13 years ago
- Detect complete horizontal gene transfer (HGT) event rapidly and accurately from complex metagenomics data.☆19Feb 2, 2026Updated 8 months ago
- Automated ACMG/AMP classification for human variants associated with congenital hearing loss☆11May 14, 2025Updated last year
- Pathogenicity prediction and prioritization of genetic variants.☆20Sep 21, 2026Updated last month
- Beyond Defaults: Creating Polished Visualizations Using Matplotlib☆13Apr 29, 2016Updated 10 years ago
- Python software framework for the ATLAS OpenData project☆11Nov 23, 2024Updated last year