ISUgenomics / common_analysesLinks
Repository of common bioinformatics scripts
☆39Updated 4 years ago
Alternatives and similar repositories for common_analyses
Users that are interested in common_analyses are comparing it to the libraries listed below
Sorting:
- web documentation for Trinotate☆48Updated 2 years ago
- my bin directory☆45Updated 2 months ago
- Analysis of TE contribution to features (transcripts or simple features). Includes utils to test enrichment.☆29Updated 6 years ago
- Evolutionary Transcriptomics with R☆49Updated this week
- A set of workflows written in Nextflow for Genome Annotation.☆45Updated last year
- Rank-based Gene Ontology analysis of gene expression data☆42Updated 2 years ago
- Tools for working with second gen assemblies, fasta sequences, etc☆93Updated 9 years ago
- Perform GWAS with gemma in a simple pipeline☆27Updated 6 months ago
- De novo annotation of young retrotransposons☆48Updated 3 years ago
- My collection of light bioinformatics analysis pipelines for specific tasks☆76Updated last year
- GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools☆51Updated 5 years ago
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆38Updated 7 months ago
- tutorial on pggb☆36Updated 10 months ago
- Transposable element polymorphism identification☆34Updated 5 years ago
- A catalogue of available long read sequencing data analysis tools☆80Updated last month
- Long Reads Annotation pipeline☆72Updated 3 years ago
- A set of functions to visualise genotypes based on a VCF☆87Updated 3 years ago
- Scripts and data for Duran & Thiergart et al. Cell, 2018☆24Updated 6 years ago
- BamDeal: a comprehensive toolkit for bam manipulation☆54Updated 2 years ago
- Software for clustering de novo assembled transcripts and counting overlapping reads☆76Updated 3 years ago
- A range of different perl scripts for manipulating sequences, conducting alignments, consensus sequences, changing formats☆30Updated 2 years ago
- 10x Genomics Linked-Read Diploid De Novo Assembler☆65Updated 6 years ago
- ☆35Updated 2 years ago
- High throughput protein function annotation with Human Readable Description (HRDs) and Gene Ontology (GO) Terms.☆67Updated 2 years ago
- Welcome to the website and github repository for the Genome Analysis Module. This website will guide the learning experience for trainees…☆26Updated 3 years ago
- Plant small RNA target prediction tool☆26Updated 8 years ago
- Transposable Elements MOvement detection using LOng reads☆25Updated 3 months ago
- PHAST☆77Updated this week
- Software for predicting library complexity and genome coverage in high-throughput sequencing.☆89Updated last year
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆56Updated this week