gencorefacility / variant-calling-pipeline
HPC based pipelines for variant calling using GATK
☆17Updated 5 years ago
Alternatives and similar repositories for variant-calling-pipeline:
Users that are interested in variant-calling-pipeline are comparing it to the libraries listed below
- optimization of ribosome P-site positioning in ribosome profiling data☆51Updated 2 months ago
- ☆56Updated 3 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆39Updated 3 years ago
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆62Updated 9 months ago
- ☆48Updated 4 years ago
- Variant Calling Pipeline Using GATK4 and Nextflow☆54Updated 2 years ago
- HiC uniform processing pipeline☆60Updated last year
- New version of JACUSA -> 2.0☆24Updated this week
- A Perl/R pipeline for plotting metagenes☆37Updated 3 years ago
- Tutorial Website☆59Updated 4 years ago
- Analysis pipeline for the GUIDE-seq assay.☆24Updated 2 months ago
- Documenting usage and experience with bioinformatic tools☆41Updated 9 years ago
- FEELnc : FlExible Extraction of LncRNA☆87Updated 7 months ago
- GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools☆49Updated 4 years ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆37Updated 2 months ago
- Tools for analyzing DNA methylation data