ListerLab / pfc_development
☆15Updated 2 years ago
Alternatives and similar repositories for pfc_development:
Users that are interested in pfc_development are comparing it to the libraries listed below
- Code used to analyze single cell RNA and ATAC sequencing in developing human brain☆31Updated 3 years ago
- identifying disease critical cell types and programs from single cell RNAseq☆52Updated 2 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆58Updated 4 months ago
- Single cell RNA-seq analysis bundle☆34Updated 5 years ago
- Code for single-cell eQTL analysis of memory T cell data in Nathan, et al. bioRxiv (2021)☆16Updated last year
- scWGCNA☆56Updated 2 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆26Updated 2 months ago
- Draw phylogenetic trees of tumor evolution☆75Updated last year
- simpler single cell RNAseq data clustering☆40Updated 8 months ago
- Functions for single cell data analysis☆29Updated 3 years ago
- R package for specialised analysis of single cell data☆37Updated 2 years ago
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- Collection of scripts for analysis of pan fetal immune atlas☆26Updated 2 years ago
- Repository for "Effective methods for bulk RNA-seq deconvolution using scRNA-seq and snRNA-seq derived transcriptomes"☆13Updated last year
- R package for pathway analysis in scRNA-seq data☆69Updated 6 months ago
- MultiK is a data-driven tool that objectively assesses the optimal number(s) of clusters based on the concept of consensus clustering via…☆21Updated last year
- ☆29Updated last year
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆32Updated 4 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆31Updated 2 months ago
- Single-cell transcriptome profiling of an adult human cell atlas of 15 major organs☆39Updated last year
- VoxHunt: Resolving human brain organoid heterogeneity through single-cell genomic comparison to spatial brain maps☆44Updated 11 months ago
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated 2 years ago
- ☆18Updated 11 months ago
- ☆35Updated 11 months ago
- Inference of cell-cell communication from single-cell RNAseq data☆47Updated last year
- Estimation of Single-Cell Potency with Single Cell Entropy☆39Updated last year
- CELLEX (CELL-type EXpression-specificity)☆39Updated last year
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆42Updated last year
- R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.☆43Updated last month
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆31Updated last year