[NeurIPS 2024 Spotlight] A cell-ontology guided transcriptome foundation model
☆25Mar 12, 2025Updated last year
Alternatives and similar repositories for scCello
Users that are interested in scCello are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A benchmark for comprehensive evaluation on protein structure tokenization methods☆56Aug 2, 2025Updated 10 months ago
- ☆30Jan 22, 2025Updated last year
- Diffusion model for gene regulatory network inference.☆30Mar 20, 2026Updated 3 months ago
- Paper collection for single cell foundation models☆41Mar 17, 2024Updated 2 years ago
- ☆50Sep 23, 2025Updated 9 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Modeling complex perturbations with CellFlow☆148Jun 22, 2026Updated last week
- ☆40Oct 31, 2025Updated 7 months ago
- Single-Cell (Perturbation) Model Library☆111Jun 15, 2026Updated 2 weeks ago
- ☆19Jan 18, 2023Updated 3 years ago
- Public Codebase supporting the paper "Modeling Cellular Perturbations with The Sparse Additive Mechanism Shift Variational Autoencoder" b…☆15Oct 20, 2023Updated 2 years ago
- NetworkCommons is a community-driven platform designed to simplify access to tools and resources for inferring context-specific protein i…☆34Jun 17, 2026Updated last week
- scDissector is an exploratory data analysis tool for clustered single-cell RNA-seq data. The tool has been developed and implemented as R…☆20Jul 21, 2023Updated 2 years ago
- Benchmark and analysis of 165 pretrained SSL models. Code for "Evaluating Self-Supervised Learning via Risk Decomposition".☆14Jul 26, 2023Updated 2 years ago
- ☆18Apr 7, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- scAce: an adaptive embedding and clustering method for scRNA-seq data☆12Sep 8, 2023Updated 2 years ago
- ☆16Dec 18, 2024Updated last year
- Connectivity-contrastive learning (CCL)☆12Feb 16, 2023Updated 3 years ago
- ☆11Oct 9, 2022Updated 3 years ago
- ☆13Mar 22, 2023Updated 3 years ago
- [𝗜𝗖𝗔𝗦𝗦𝗣 𝟮𝟬𝟮𝟱 𝗢𝗿𝗮𝗹] ImageFlowNet: Forecasting Multiscale Image-Level Trajectories of Disease Progression with Irregularly-Sa…☆15May 2, 2026Updated last month
- PULSAR: a Foundation Model for Multi-scale and Multicellular Biology☆34Mar 1, 2026Updated 3 months ago
- Arc Virtual Cell Atlas☆546Jun 10, 2026Updated 2 weeks ago
- ☆15Jun 27, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Deep fusion of spatial transcriptomics and histology images for interpretable high-definition embedding mapping☆18May 26, 2026Updated last month
- [MICCAI 2025] GL-LCM: Global-Local Latent Consistency Models for Fast High-Resolution Bone Suppression in Chest X-Ray Images☆17Mar 12, 2026Updated 3 months ago
- ☆12Aug 19, 2025Updated 10 months ago
- ☆15Sep 30, 2023Updated 2 years ago
- ☆15Jul 24, 2024Updated last year
- [COLM 2024] Large Language Models as Biomedical Hypothesis Generators: A Comprehensive Evaluation☆15Jul 15, 2024Updated last year
- scPRAM accurately predicts single-cell gene expression perturbation response based on attention mechanism☆18Oct 17, 2024Updated last year
- Starter repo for regl explorations☆10May 26, 2017Updated 9 years ago
- code for paper: Identifiability Guarantees for Causal Disentanglement from Soft Interventions☆15Nov 27, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆21Nov 3, 2025Updated 7 months ago
- ☆13Apr 23, 2025Updated last year
- [NeurIPS 2025] Beyond Masked and Unmasked: Discrete Diffusion Models via Partial Masking☆31Jun 15, 2026Updated 2 weeks ago
- Spatial Transcriptomics Dashboard☆27Jul 6, 2023Updated 2 years ago
- Annotated sequence data☆11Feb 2, 2025Updated last year
- Genomic sequence preprocessing toolkit☆14Jun 22, 2026Updated last week
- [ICASSP 2025 Oral] ImageFlowNet: Forecasting Multiscale Image-Level Trajectories of Disease Progression with Irregularly-Sampled Longitud…☆29Feb 14, 2026Updated 4 months ago