Helper Functions for LIBD Deconvolution
☆11Sep 25, 2026Updated 3 weeks ago
Alternatives and similar repositories for DeconvoBuddies
Users that are interested in DeconvoBuddies are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Count ratio uncertainty modeling base linear regression☆16Sep 23, 2026Updated last month
- Querying cellular states and programs by learning representations of gene sets☆16Nov 2, 2025Updated 11 months ago
- NMF and complete deconvolution algorithm☆10Sep 21, 2026Updated last month
- R package for gene selection using k-NN graphs.☆15Jun 12, 2023Updated 3 years ago
- cross-species analysis of cell identities, markers and regulations☆13Jul 11, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Gene expression deconvolution using dampened weighted least squares☆38Feb 4, 2021Updated 5 years ago
- Local Spatial Gradient Inference☆12Jul 28, 2025Updated last year
- BioCarta pathway images☆11Jan 30, 2026Updated 8 months ago
- Repel Visually Similar Colors for Colorblind Users (CRAN)☆11Aug 22, 2026Updated 2 months ago
- Experimental design framework for scRNAseq population studies (eQTL and DE)☆52Jan 8, 2025Updated last year
- K-means clustering for large single-cell datasets☆13Feb 10, 2026Updated 8 months ago
- clustering method for single-cell transcriptomics data☆11Oct 11, 2026Updated 2 weeks ago
- Perform differential expression analysis on cohort-scale single cell datasets using linear mixed models☆25Sep 23, 2026Updated last month
- R package for CS-CORE, a statistical method for cell-type-specific co-expression inference from single cell RNA-sequencing data☆31May 4, 2026Updated 5 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆10Mar 12, 2023Updated 3 years ago
- 🧹 Remove technical noise from single-cell RNA sequencing count data with expectation-maximization☆28Oct 9, 2026Updated 2 weeks ago
- MuData-compatible storage for bioconductor's MultiAssayExperiment☆11Feb 24, 2025Updated last year
- R package for distinguishing cells from background barcodes in droplet-based single-cell RNA-seq data☆11Apr 19, 2023Updated 3 years ago
- R interface to the Pan-human Azimuth neural network for cell type annotation☆15Jul 29, 2026Updated 2 months ago
- An R package designed to demultiplex cell hashing data☆32Oct 10, 2026Updated 2 weeks ago
- Gene Ontology (GO) enrichment analysis☆12Aug 7, 2023Updated 3 years ago
- Efficiently compute robust markers across single-cell datasets☆13Apr 21, 2021Updated 5 years ago
- A package for comparing cell type abundances between conditions☆12Oct 14, 2026Updated last week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Complex Heatmaps Using Base Graphics☆17Mar 29, 2026Updated 6 months ago
- Pipeline for generating RNAseq-based cancer patient reports☆15Aug 24, 2026Updated 2 months ago
- MASC: Mixed-effects Association testing for Single Cells☆16Apr 16, 2021Updated 5 years ago
- An R package to analyze single-cell V(D)J data☆30Nov 13, 2023Updated 2 years ago
- Network analyses of single cell-based digital twins for personalized treatment of inflammatory disease☆17Mar 23, 2024Updated 2 years ago
- Exon-Intron Split Analysis (EISA) in R☆18Aug 27, 2026Updated last month
- STcompare is an R package for comparing spatial gene expression patterns across spatial transcriptomics (ST) datasets☆14Updated this week
- ☆14Sep 1, 2026Updated last month
- Spatial transcriptomics analyses and decoding in R☆27Jul 8, 2026Updated 3 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- R package for visualization of highly multiplexed imaging data☆37Aug 25, 2026Updated last month
- ☆12Aug 24, 2019Updated 7 years ago
- Gene group activity utility functions for Scanpy☆118Dec 21, 2024Updated last year
- RIPPLE - Spatial transcriptomics analysis of a cell's influence on its neighbors' transcriptome☆41Sep 14, 2026Updated last month
- ☆18May 21, 2024Updated 2 years ago
- Dimensionality reduction and batch integration methods for single cell data☆17Feb 9, 2023Updated 3 years ago
- CITEViz: Replicating the Interactive Flow Cytometry Workflow in CITE-Seq☆11Jun 6, 2024Updated 2 years ago