Alternatives and similar repositories for ggtreeExtra:

Users that are interested in ggtreeExtra are comparing it to the libraries listed below

• YuLab-SMU / aplot
  Decorate a plot with associated information
  ☆103Updated 2 weeks ago
• YuLab-SMU / tidytree
  A Tidy Tool for Phylogenetic Tree Data Manipulation
  ☆55Updated 7 months ago
• XiaoLuo-boy / ggheatmap
  ggplot2 version of heatmap
  ☆87Updated last year
• adw96 / DivNet
  diversity estimation under ecological networks
  ☆83Updated last year
• microbiome / mia
  Microbiome analysis
  ☆52Updated this week
• fkeck / bioseq
  A Toolbox for Manipulating Biological Sequences in R
  ☆22Updated 2 years ago
• kassambara / fastqcr
  fastqcr: Quality Control of Sequencing Data
  ☆70Updated last year
• tpq / propr
  [OFFICIAL] [CoDA] An R package to calculate proportionality and other measures for compositional data
  ☆71Updated last month
• yijuanhu / LDM-Archive
  Linear Decomposition Model
  ☆24Updated last year
• YuLab-SMU / treedata-book
  a complete reference book for treeio, tidytree and ggtree packages
  ☆104Updated 2 years ago
• FrederickHuangLin / ANCOMBC
  Differential abundance (DA) and correlation analyses for microbial absolute abundance data
  ☆120Updated 2 months ago
• loukesio / ggvolc
  𝐠𝐠𝐯𝐨𝐥𝐜 effortlessly translates differential expression datasets and RNAseq data into informative volcano plots. Highlight genes of …
  ☆64Updated last year
• statdivlab / corncob
  Count Regression for Correlated Observations with the Beta-binomial
  ☆106Updated 6 months ago
• ying14 / yingtools2
  Ying's tools for analysis, with particular focus on microbiome data
  ☆41Updated 2 months ago
• emmanuelparadis / ape
  Analysis of Phylogenetics and Evolution
  ☆64Updated last month
• GMOD / JBrowseR
  R interface to the JBrowse 2 Linear Genome View.
  ☆35Updated last year
• adw96 / breakaway
  Species richness with high diversity
  ☆68Updated last year
• vmikk / metagMisc
  Miscellaneous functions for metagenomic analysis.
  ☆49Updated last month
• Bioconductor / GenomicRanges
  Representation and manipulation of genomic intervals
  ☆44Updated 3 months ago
• lawremi / ggbio
  Grid and ggplot2 based visualization for biological data
  ☆111Updated last year
• mblstamps / stamps2019
  Materials for the STAMPS 2019 course at the MBL in Woods Hole, MA, USA
  ☆35Updated 5 years ago
• shandley / Microbiome-Analysis-Using-R
  Microbiome Analysis Using R Workshop originally organized for the 2018 ASM General Meeting in Atlanta, GA, but regularly updated since.
  ☆27Updated 2 years ago
• tidyomics / plyranges
  A grammar of genomic data transformation
  ☆143Updated 3 months ago
• Github-Yilei / ggcor
  The copyright of ggcor belongs to HouyunHuang who closed the account of github. Refer to the Citation for details
  ☆36Updated 3 years ago
• waldronlab / lefser
  R implementation of the LEfSe method
  ☆56Updated 3 weeks ago
• gladkia / igvShiny
  An htmlwidget version of igv, for RStudio and Shiny apps
  ☆37Updated 3 months ago
• lvulliard / BioCircos.R
  Htmlwidgets binding R commands to the BioCircos.js library
  ☆37Updated 5 years ago
• mikemc / speedyseq
  Speedy versions of phyloseq functions
  ☆47Updated 10 months ago
• umerijaz / microbiomeSeq
  An R package for microbial community analysis in an environmental context
  ☆66Updated 4 years ago
• drostlab / metablastr
  Seamless Integration of BLAST Sequence Searches in R
  ☆31Updated last year