SamBuckberry / RUN-WGCNA
Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)
☆28Updated 9 years ago
Alternatives and similar repositories for RUN-WGCNA:
Users that are interested in RUN-WGCNA are comparing it to the libraries listed below
- documentation for trackViewer☆29Updated 5 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆36Updated last month
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆19Updated 6 years ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆35Updated 6 years ago
- Filtering of PDX samples for mouse derived reads☆26Updated 2 years ago
- R package wrapping bedtools☆38Updated 5 months ago
- Disambiguation algorithm for reads aligned to human and mouse genomes using Tophat or BWA mem☆30Updated 6 years ago
- Summer school course materials collection☆25Updated 6 years ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated last year
- Merge fastq files split over lanes☆20Updated 7 years ago
- A small R package to make sequencing read coverage plots in R.☆37Updated 2 years ago
- SPP - R package for analysis of ChIP-seq and other functional sequencing data☆40Updated 3 years ago
- Accurate estimation and robust modelling of translation dynamics at codon resolution☆20Updated 7 years ago
- Workshop • Analysis of RNA-seq data☆35Updated 11 months ago
- Transcript quantification import with automatic metadata detection☆67Updated 2 weeks ago
- ChIP-seq DC and QC Pipeline☆34Updated 3 years ago
- ☆36Updated 2 years ago
- workshop website on readthedocs☆19Updated 2 months ago
- Tool for RNA-Seq analysis.☆38Updated 2 years ago
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆30Updated last year
- ☆29Updated 5 years ago
- An R interface to the MEME Suite☆49Updated 4 months ago
- 📊 An R package of RNA-seq workflow☆16Updated 2 years ago
- Parse TF motifs from public databases, read into R, and scan using 'rtfbs'.☆22Updated 6 years ago
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 3 years ago
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆28Updated last month
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated last year
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/annotatr.html Bug Reports: https://support.bioconductor.org/p/new/post…☆26Updated 5 months ago
- Scripts to import your FeatureCounts output into DEXSeq☆32Updated 6 years ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 5 years ago