ggNetView is an R package for network analysis and visualization. It provides flexible and publication-ready tools for exploring complex biological and ecological networks.
☆112Jul 16, 2026Updated last week
Alternatives and similar repositories for ggNetView
Users that are interested in ggNetView are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Network analysis for multi-omics☆119May 24, 2026Updated 2 months ago
- EasyMultiOmics: An R package for comprehensive multi-omics data mining in systematic microbiome research☆108Dec 17, 2025Updated 7 months ago
- One-step to Cluster and Visualize Gene Expression Matrix☆388Jun 25, 2026Updated last month
- LorMe package for R:Lightening One-code Resolving Microbial Ecology Program☆18Jul 20, 2026Updated last week
- Everything is Linkable☆226Oct 22, 2025Updated 9 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆22Jan 14, 2024Updated 2 years ago
- ☆10Jun 13, 2020Updated 6 years ago
- Plant genome assembly and annotation pipeline using snakemake☆55May 14, 2025Updated last year
- ☆24Oct 16, 2024Updated last year
- ☆391Jan 21, 2026Updated 6 months ago
- scripts used in Rice Pangenome Projects (Evolution).☆16Oct 29, 2023Updated 2 years ago
- Microbial ecological network visualization clustering☆154Nov 20, 2025Updated 8 months ago
- Generate masks for scRNA-seq clusters on t-SNE or UMAP plots☆46Updated this week
- Code for Article "A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species r…☆24Jun 14, 2024Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- An R package for single-cell and spatial omics analysis, integration, interpretation, and visualization.☆289Updated this week
- ☆152Dec 30, 2025Updated 6 months ago
- BrumiR: A toolkit for de novo discovery of microRNAs from sRNA-seq data.☆12Sep 7, 2022Updated 3 years ago
- MetaflowX: A Scalable and Resource-Efficient Workflow for Multi-Strategy Metagenomic Analysis☆43Feb 6, 2026Updated 5 months ago
- ☆12Jun 24, 2026Updated last month
- EGDB: A Comprehensive Multi-Omics Database for Energy Grasses and the Epigenomic Atlas of Pearl Millet☆42Jan 30, 2025Updated last year
- Pipeline for lncRNA, Circular RNA, and novel mRNA identification.☆11May 5, 2023Updated 3 years ago
- A Comprehensive and Integrated Framework for Transcriptomic Data Analysis☆21Mar 3, 2026Updated 4 months ago
- ☆13Jun 1, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- An implement R package to visualize GSEA results☆230Jul 14, 2026Updated 2 weeks ago
- Time-resolved single-cell transcriptomics (Zman-seq)☆12Apr 9, 2025Updated last year
- Easy Amplicon data analysis pipeline☆369Apr 20, 2026Updated 3 months ago
- Predicting Activated Sludge Microbial Communities based on time series of continuous sludge samples by using graph neural networks☆24Jul 10, 2026Updated 2 weeks ago
- A filter algorithm with program to filter an alignment or mapping file☆12May 15, 2025Updated last year
- PhyloForge: Unifying micro and macro evolution with comprehensive genomic signals☆10May 17, 2024Updated 2 years ago
- Interpretation and visualization of microbiome charts☆550Jul 22, 2025Updated last year
- A number of functions were generated to perform pan-cancer DEG analysis, correlation analysis between gene expression and TMB, MSI, TIME,…☆124Mar 28, 2025Updated last year
- Antibiotic resistance genes (ARGs) have accelerated microbial threats to human health during the last decade. Here we determined the risk…☆19Apr 8, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Trans-Kingdom Marker Gene Pipeline for Taxonomic Profiling of Human Metagenomes☆23Nov 24, 2025Updated 8 months ago
- Deposited codes for snMultiome in human cortex manuscript☆14Aug 12, 2024Updated last year
- genomic variant frequency estimation☆12Sep 7, 2025Updated 10 months ago
- A Package for Ribosome Profiling Data Analysis☆18Jan 17, 2026Updated 6 months ago
- A wrapper to identify, bin, classify, and predict host-viral relationship for viruses☆91Dec 27, 2024Updated last year
- ☆19Nov 11, 2024Updated last year
- Easier download/extract of FASTA/Q read data and metadata from the ENA, NCBI, AWS or GCP.☆313Updated this week