The official pipeline for flexible and high-performance analysis of DNBelab C Serie single-cell data.
☆150Jan 19, 2026Updated 3 months ago
Alternatives and similar repositories for DNBelab_C_Series_HT_scRNA-analysis-software
Users that are interested in DNBelab_C_Series_HT_scRNA-analysis-software are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An open source and flexible pipeline to analyze DNBelab C Series single-cell RNA datasets.☆41Nov 24, 2022Updated 3 years ago
- ☆190Sep 18, 2024Updated last year
- ☆14Apr 11, 2024Updated 2 years ago
- A collection of tools to process single-cell omics datasets.☆52Apr 23, 2026Updated 2 weeks ago
- Human Muscle Ageing Cell Atlas☆21Mar 8, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆21Jan 10, 2025Updated last year
- UVC, a very accurate small-variant caller (https://doi.org/10.1093/bib/bbab458)☆14May 18, 2025Updated 11 months ago
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆18Mar 27, 2026Updated last month
- ☆19Jul 22, 2025Updated 9 months ago
- Whole genome workflows☆13Nov 9, 2024Updated last year
- ☆10Jul 9, 2024Updated last year
- iterative clustering pipeline of big single cell datasets.☆39Sep 5, 2025Updated 8 months ago
- ☆12Jun 11, 2023Updated 2 years ago
- R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data☆324Nov 1, 2022Updated 3 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Calculates the Variant Allele Fraction of variants in VCF files☆19Nov 28, 2024Updated last year
- ☆27Jun 4, 2023Updated 2 years ago
- A toolkit of spatial transcriptomic analysis.☆279Apr 7, 2026Updated last month
- ☆12Dec 4, 2023Updated 2 years ago
- This repository includes codes and data example used in the "Integrative Spatial Analysis Reveals Tumor Heterogeneity and Immune Colon…☆16May 26, 2025Updated 11 months ago
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆40Jan 30, 2024Updated 2 years ago
- Spatiotemporal modeling of spatial transcriptomics☆337Feb 25, 2026Updated 2 months ago
- Collaboration with Montine, Chang, and Montgomery labs on Alzheimers / Parkinson's ATAC-seq analysis☆46Aug 12, 2020Updated 5 years ago
- Analytical tools and pipelines for bulk and single cell epigenomic and human genetic data☆26Nov 17, 2020Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Axolotl Regenerative Telencehpalon Interpretation via Spatiotemporal Transcriptomic Atlas☆21Jul 3, 2022Updated 3 years ago
- Open4Gene, A Hurdle Model-based Method for Peak-to-Gene Linkage Analysis☆17Mar 17, 2026Updated last month
- Methods for decontamination of single cell data☆63Feb 16, 2025Updated last year
- Publically accessible code for DIISCO method☆13Oct 15, 2025Updated 6 months ago
- ☆87Jun 29, 2024Updated last year
- A Tool for integrated Quality Control and Preprocessing on FASTQ or BAM/CRAM files☆114Mar 28, 2024Updated 2 years ago
- Spatial Cellular Estimator for Tumors☆63Apr 28, 2026Updated last week
- A Spatial Transcriptomics Geospatial Profile Recovery System Tool through Anchors☆19Jul 24, 2025Updated 9 months ago
- The scripts used for the analyses in TOME project☆24Nov 28, 2025Updated 5 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Nextflow pipeline for cross-species integration and assessment of single cell RNA-seq datasets☆43Jul 20, 2025Updated 9 months ago
- PaNeV: an R package for a pathway-based network visualization☆10Aug 25, 2025Updated 8 months ago
- https://relab.xidian.edu.cn/AgeAnno/#/☆14Oct 22, 2022Updated 3 years ago
- A tool for identifying Phenotype-Associated cell Subpopulations from single-cell sequencing data by integrating bulk data☆18Jan 16, 2026Updated 3 months ago
- 单细胞分析的中文pipeline☆287Apr 5, 2024Updated 2 years ago
- A toolkit for analyzing architectural stripes☆20Dec 1, 2024Updated last year
- This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Pro…☆90Oct 9, 2024Updated last year