MGI-tech-bioinformatics / DNBelab_C_Series_HT_scRNA-analysis-softwareLinks
The official pipeline for flexible and high-performance analysis of DNBelab C Serie single-cell data.
☆121Updated this week
Alternatives and similar repositories for DNBelab_C_Series_HT_scRNA-analysis-software
Users that are interested in DNBelab_C_Series_HT_scRNA-analysis-software are comparing it to the libraries listed below
Sorting:
- ☆112Updated last year
- ☆115Updated 2 months ago
- wrapper scripts for convenient STARsolo processing of 10X and other scRNA-seq☆69Updated 5 months ago
- SCSA: cell type annotation for single-cell RNA-seq data☆92Updated 2 years ago
- CUT&RUN and CUT&Tag data processing and analysis☆113Updated 8 months ago
- Publication Page for Satpathy*, Granja* et al 2019☆95Updated 5 years ago
- Analysis pipeline for ATAC-seq data☆79Updated 2 years ago
- The integration of single cell rank-based gene set enrichment analysis☆138Updated 4 months ago
- scDIOR: Single cell data IO softwaRe☆150Updated 3 years ago
- R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …☆113Updated 2 months ago
- collected resource for scRNA-seq analysis☆67Updated 2 years ago
- SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples☆71Updated 3 years ago
- Tutorial of single-cell RNA-ATAC multiomic sequencing data analysis☆68Updated last year
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆110Updated 6 months ago
- SNV calling from single cell sequencing☆114Updated last year
- ☆175Updated last year
- Pipeline for exploring metebolic heterogeneity at single-cell resolution☆74Updated 5 years ago
- This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset☆152Updated 4 years ago
- A tool for semi-automatic cell type harmonization and integration☆115Updated 2 weeks ago
- This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Pro…☆86Updated last year
- Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma☆79Updated last year
- Analysis pipeline for ATAC-seq Data☆62Updated 4 years ago
- Basic workflow for ATAC-seq analysis☆90Updated last year
- ☆88Updated 2 months ago
- Single-nuclei RNA-seq and ATAC-seq in Alzheimer's disease☆97Updated 4 years ago
- Create cisTarget databases☆54Updated 5 months ago
- A tool for detecting somatic variants in single cell data☆215Updated last year
- This repository holds the scripts used to analyze the data presented in "A multi-omic single-cell landscape of human gynecologic malignan…☆49Updated 2 years ago
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆38Updated last year
- Single Cell Analysis Pipelines☆110Updated 2 weeks ago