Learning Kinetic Models from Time Series Proteomics and Metabolomics Data
☆30Jun 21, 2022Updated 3 years ago
Alternatives and similar repositories for KineticLearning
Users that are interested in KineticLearning are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Framework for Object Oriented Modelling of Bioprocesses☆18Feb 18, 2021Updated 5 years ago
- Analysis of ensembles of metabolic network reconstructions☆21Feb 9, 2026Updated 2 months ago
- ☆19Dec 7, 2020Updated 5 years ago
- Benchmarking human and machine learning performance.☆34Jun 9, 2020Updated 5 years ago
- Model predictive control (MPC) for fermentations☆12Feb 28, 2019Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A tutorial on cobrapy☆10Nov 23, 2022Updated 3 years ago
- A python library for simulating field theories with topological defects☆15Feb 3, 2026Updated 2 months ago
- Python Environment for Modeling and Simulating Biological Systems☆137Apr 10, 2026Updated 3 weeks ago
- A suite of scientific workflows to assess metrics to compare efficacy of protein-based tumor deconvolution algorithms.☆16Jan 15, 2024Updated 2 years ago
- All-Atom (Including Hydrogen!) Ligand-Conditioned Protein Sequence Design & Sidechain Packing GNN☆29Mar 30, 2026Updated last month
- ☆18May 31, 2024Updated last year
- Teaching materials for 6-7th March 2018 delivery of introductory bioinformatics training course for IBioIC.☆20Mar 12, 2018Updated 8 years ago
- A Python wrapper for the Chemistry Development Kit (CDK)☆38Sep 9, 2025Updated 7 months ago
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆20Jan 24, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Software tool for metabolic modelling in Systems Biology☆10Dec 30, 2020Updated 5 years ago
- NRPSpredictor2 is a program to predict the specificity of bacterial and fungal adenylation domains.☆11Oct 7, 2019Updated 6 years ago
- BiGMeC - Biosynthetic Gene cluster Metabolic pathway Constructor☆16May 14, 2023Updated 2 years ago
- Code repository for paper "Generative artificial intelligence GPT-4 accelerates knowledge mining and machine learning for synthetic biolo…☆13May 14, 2023Updated 2 years ago
- ☆38Oct 16, 2023Updated 2 years ago
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆32Jan 5, 2025Updated last year
- Ultra-fast 5' and 3' demultiplexer☆30Apr 23, 2024Updated 2 years ago
- MOCCASIN translates basic ODE-based MATLAB models of biological processes into SBML format.☆13Aug 21, 2024Updated last year
- Mechanistic models in fermentation☆22Aug 30, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Natural Product Discovery tools -- a toolkit containing various pipelines for in silico analysis of natural product mass spectrometry da…☆29Aug 19, 2022Updated 3 years ago
- ☆28Nov 30, 2023Updated 2 years ago
- Score an Affinity Purification Mass Spectrometry Proteomics Experiment for Interactor Confidence☆11Jun 24, 2015Updated 10 years ago
- ☆13Jul 24, 2024Updated last year
- LAVA: Lightweight Assignment of Variant Alleles☆17Dec 27, 2017Updated 8 years ago
- A tool for annotation-free differential analysis of tissue-specific pre-mRNA alternative splicing patterns☆30Apr 10, 2023Updated 3 years ago
- ☆21Mar 26, 2022Updated 4 years ago
- ☆15Dec 12, 2022Updated 3 years ago
- scripts for predicting natural product activity from biosynthetic gene cluster sequences☆24Mar 16, 2026Updated last month
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Mackinac: A bridge between ModelSEED and COBRApy☆19Aug 20, 2018Updated 7 years ago
- Created a RNN with LSTM cells to learn patterns from SMILES Strings, and use them to generate new molecular structures.☆18Mar 18, 2019Updated 7 years ago
- ☆10Oct 21, 2023Updated 2 years ago
- framed: a metabolic modeling package for python☆26Nov 7, 2019Updated 6 years ago
- A couple of tools I find indispensable for post orthomcl down-stream analysis.☆11Oct 2, 2019Updated 6 years ago
- Molcas wavefunction assistent☆13Jul 2, 2021Updated 4 years ago
- Sashimi plots for RNA-seq data using detected transcripts☆33Apr 23, 2026Updated last week