Learning Kinetic Models from Time Series Proteomics and Metabolomics Data
☆30Jun 21, 2022Updated 3 years ago
Alternatives and similar repositories for KineticLearning
Users that are interested in KineticLearning are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python package for building SBML models without needing to use libSBML.☆11Aug 18, 2021Updated 4 years ago
- Framework for Object Oriented Modelling of Bioprocesses☆18Feb 18, 2021Updated 5 years ago
- DSResSol: A sequence-based solubility predictor created with Dilated Squeeze Excitation Residual Networks☆12May 30, 2024Updated 2 years ago
- Analysis of ensembles of metabolic network reconstructions☆22May 20, 2026Updated 3 weeks ago
- ☆19Dec 7, 2020Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Model predictive control (MPC) for fermentations☆12Feb 28, 2019Updated 7 years ago
- A tutorial on cobrapy☆10Nov 23, 2022Updated 3 years ago
- A python library for simulating field theories with topological defects☆16Feb 3, 2026Updated 4 months ago
- R package for fitting kinetic models with one or more state variables to chemical degradation data☆12Nov 28, 2025Updated 6 months ago
- ☆18May 31, 2024Updated 2 years ago
- Teaching materials for 6-7th March 2018 delivery of introductory bioinformatics training course for IBioIC.☆20Mar 12, 2018Updated 8 years ago
- A Python wrapper for the Chemistry Development Kit (CDK)☆38Sep 9, 2025Updated 9 months ago
- Software tool for metabolic modelling in Systems Biology☆10Dec 30, 2020Updated 5 years ago
- BiGMeC - Biosynthetic Gene cluster Metabolic pathway Constructor☆16May 14, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Code repository for paper "Generative artificial intelligence GPT-4 accelerates knowledge mining and machine learning for synthetic biolo…☆13May 14, 2023Updated 3 years ago
- ☆38Oct 16, 2023Updated 2 years ago
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆32Jan 5, 2025Updated last year
- Ultra-fast 5' and 3' demultiplexer☆30Apr 23, 2024Updated 2 years ago
- MOCCASIN translates basic ODE-based MATLAB models of biological processes into SBML format.☆13Aug 21, 2024Updated last year
- Mechanistic models in fermentation☆22Aug 30, 2022Updated 3 years ago
- Natural Product Discovery tools -- a toolkit containing various pipelines for in silico analysis of natural product mass spectrometry da…☆29Aug 19, 2022Updated 3 years ago
- ☆28Nov 30, 2023Updated 2 years ago
- Autoencoder on tabular data☆15Mar 17, 2021Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Score an Affinity Purification Mass Spectrometry Proteomics Experiment for Interactor Confidence☆11Jun 24, 2015Updated 10 years ago
- ☆13Jul 24, 2024Updated last year
- LAVA: Lightweight Assignment of Variant Alleles☆17Dec 27, 2017Updated 8 years ago
- ☆15Dec 12, 2022Updated 3 years ago
- scripts for predicting natural product activity from biosynthetic gene cluster sequences☆27Mar 16, 2026Updated 2 months ago
- Mackinac: A bridge between ModelSEED and COBRApy☆19Aug 20, 2018Updated 7 years ago
- ☆10Oct 21, 2023Updated 2 years ago
- framed: a metabolic modeling package for python☆26Nov 7, 2019Updated 6 years ago
- A couple of tools I find indispensable for post orthomcl down-stream analysis.☆11Oct 2, 2019Updated 6 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Sashimi plots for RNA-seq data using detected transcripts☆33May 1, 2026Updated last month
- Code for paper "ToxIBTL: prediction of peptide toxicity based on information bottleneck and transfer learning"☆13Jan 24, 2022Updated 4 years ago
- ☆14Apr 8, 2022Updated 4 years ago
- High-speed physical quantities and dimensions in Python☆15May 8, 2026Updated last month
- Github for the TOPCONS2☆17Mar 6, 2025Updated last year
- Toolbox for including enzyme constraints on a genome-scale model.☆90May 29, 2026Updated last week
- Parser for Ghost Koala☆10Aug 23, 2018Updated 7 years ago