retrieve protein sequence identifiers and metadata from http://uniprot.org
☆69Jan 4, 2026Updated 6 months ago
Alternatives and similar repositories for uniprot
Users that are interested in uniprot are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python package to query and analyse UniProt☆25Sep 8, 2020Updated 5 years ago
- ☆34Oct 27, 2021Updated 4 years ago
- command-line and python interface to the uniprot database☆10Jun 11, 2015Updated 11 years ago
- Shiny ClinVar web server source code☆12Apr 29, 2019Updated 7 years ago
- An R package for handling and analysing imaging mass cytometry data☆33May 19, 2026Updated 2 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Train word2vec on Pubmed data, compare 2 GO terms, compare 2 genes.☆12Apr 7, 2017Updated 9 years ago
- A python script used to annotate genomic intervals.☆18May 29, 2020Updated 6 years ago
- A set of scripts to help automate the construction of data sets for multi-gene phylogenetic analyses.☆13Mar 13, 2019Updated 7 years ago
- Simple pure Python SAM parser and objects for working with SAM records☆64Mar 20, 2026Updated 4 months ago
- orthology assignment using phylogenetic and network analyses☆57May 5, 2026Updated 2 months ago
- Python programming workshop for bioinformatics☆10Jul 13, 2021Updated 5 years ago
- Convert PDB residues to their Uniprot equivalents☆17Mar 31, 2020Updated 6 years ago
- Software for error-tolerant coding of information into DNA sequences using finite-state transducers.☆12Jan 8, 2017Updated 9 years ago
- Docker image of JBrowse Genome Browser☆15Apr 12, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- SDRF official validator and converts SDRF to pipeline configuration files☆36Jul 11, 2026Updated last week
- A Swiss army knife for genome projects☆15Aug 13, 2013Updated 12 years ago
- mzTab Reporting MS-based Proteomics and Metabolomics Results☆47Jun 12, 2026Updated last month
- Data visualisation web components for the life sciences.☆148Jul 9, 2026Updated last week
- Python package for access to online biomedical resources, usually via REST APIs.☆19Jun 25, 2026Updated 3 weeks ago
- MVP (Qi et al 2021) source code☆17May 11, 2021Updated 5 years ago
- A workflow assembler for cancer genome analytics and informatics☆19Nov 16, 2016Updated 9 years ago
- A Python library for fast, thread-safe computations on phylogenetic trees☆29Feb 19, 2026Updated 5 months ago
- ☆12Apr 21, 2016Updated 10 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A tool to analyze synteny at the protein level.☆14Mar 28, 2018Updated 8 years ago
- Evoker is a graphical tool for plotting genotype intensity data in order to assess quality of genotype calls. It implements a compact, bi…☆13Dec 21, 2017Updated 8 years ago
- Computational method for Comparative ReConstruction of genome-scale metabolic networks☆22Mar 23, 2018Updated 8 years ago
- A parallel API crawler for the retrieval of Kyoto Encyclopedia of Genes and Genomes metabolic and genomics data.☆22Jul 22, 2023Updated 2 years ago
- ☆19May 27, 2025Updated last year
- Tip and tricks for VCF files☆21Sep 26, 2018Updated 7 years ago
- non-redundant, compressed, journalled, file-based storage for biological sequences☆52Nov 10, 2025Updated 8 months ago
- DEqMS is a tool for quantitative proteomic analysis☆29Apr 16, 2025Updated last year
- A Python package for gene network analysis☆33Jun 22, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- PHOsphoproteomic dissecTiOn using Networks☆16Jan 25, 2021Updated 5 years ago
- Code for NeurIPS 2024 paper "A SARS-CoV-2 Interaction Dataset and VHH Sequence Corpus for Antibody Language Models"☆16Oct 17, 2024Updated last year
- A package code for fitting power law distributions using Bayesian or Maximum Likelihood approaches.☆12Aug 1, 2019Updated 6 years ago
- Assembly based core genome SNP alignments for bacteria☆25Oct 23, 2019Updated 6 years ago
- Orientation of the protein-protein interaction network using network diffusion techniques☆15Mar 16, 2021Updated 5 years ago
- abi2fastq is a small utility to convert Sanger sequencing reads in .abi (applied biosystems) format to FASTQ☆11Sep 19, 2017Updated 8 years ago
- Annotate sequences from BLAST against KEGG DB with KO numbers and summarize them in KEGG modules.☆23Dec 27, 2018Updated 7 years ago