Alternatives and similar repositories for uniprot

Users that are interested in uniprot are comparing it to the libraries listed below

• ViennaRNA / forgi
  An RNA manipulation library.
  ☆56Updated last year
• multimeric / Unipressed
  Comprehensive Python client for the Uniprot REST API
  ☆53Updated 2 months ago
• ebi-uniprot / ProtVista
  A BioJS viewer for protein sequence features
  ☆51Updated 3 years ago
• openvax / pepdata
  Python interface to amino acid properties and IEDB
  ☆57Updated last year
• ViennaRNA / forna
  Create force-directed graphs of RNA secondary structures.
  ☆110Updated 5 years ago
• SBRG / ssbio
  A Python framework for structural systems biology
  ☆110Updated 5 years ago
• varnivey / ipanda
  insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis…
  ☆29Updated 8 years ago
• benchling / clustalo-python
  A Python wrapper around Clustal Omega (http://www.clustal.org/omega/)
  ☆26Updated 3 years ago
• mobiusklein / glypy
  Glycan Analysis and Glycoinformatics Library for Python
  ☆36Updated 6 months ago
• andrewguy / biostructmap
  A Python package for mapping sequence aligned data onto protein structures
  ☆36Updated 4 years ago
• r2dt-bio / R2DT
  Visualise RNA secondary structure in consistent, reproducible and recognisable layouts
  ☆77Updated 2 weeks ago
• openvax / mhctools
  Python interface to running command-line and web-based MHC binding predictors
  ☆99Updated last year
• MedChaabane / deepRAM
  End-to-end deep learning toolkit for predicting protein binding sites and motifs.
  ☆45Updated 6 years ago
• FowlerLab / Enrich2
  Tool for deep mutational scanning experiments.
  ☆55Updated 9 months ago
• iseekwonderful / PyPathway
  A python package for pathway visualization
  ☆38Updated 5 years ago
• syntheticgenomics / sgidspace
  ☆21Updated 7 years ago
• gecrooks / weblogo
  WebLogo 3: Sequence Logos redrawn
  ☆152Updated 7 months ago
• SBRG / Protein_ML
  Machine learning workflows for analyzing high-throughput protein data
  ☆26Updated 9 years ago
• ablab / npdtools
  Natural Product Discovery tools -- a toolkit containing various pipelines for in silico analysis of natural product mass spectrometry da…
  ☆28Updated 3 years ago
• dmnfarrell / epitopepredict
  Python package and command line tool for epitope prediction
  ☆52Updated last year
• johli / seqprop
  Stochastic Sequence Propagation - A Keras Model for optimizing DNA, RNA and protein sequences based on a predictor
  ☆50Updated last year
• OATML / EVE
  Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…
  ☆66Updated 3 years ago
• jessegmeyerlab / proteomics-tutorial
  ☆67Updated last year
• CCSB-DFCI / HuRI_paper
  Code for the analyses in the human reference interactome paper.
  ☆28Updated 3 years ago
• SBRG / Recon3D
  A 3-Dimensional View of Human Metabolism and Disease
  ☆31Updated 7 years ago
• bio-ontology-research-group / deepgo
  Function prediction using a deep ontology-aware classifier
  ☆85Updated 3 years ago
• eternagame / draw_rna
  Draw RNA secondary structures in python.
  ☆49Updated 5 months ago
• biothings / mygene.py
  mygene is an easy-to-use Python wrapper to access MyGene.Info services.
  ☆95Updated 10 months ago
• wilkelab / ProteinEvolutionToolbox
  ☆15Updated 9 years ago
• lwgray / pyEntrezId
  Converts Ensembl, Uniprot, and HGNC IDs to Entrez Gene Id
  ☆47Updated 2 years ago