abcucberkeley / cpp-zarrLinks
☆17Updated 2 months ago
Alternatives and similar repositories for cpp-zarr
Users that are interested in cpp-zarr are comparing it to the libraries listed below
Sorting:
- Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data☆19Updated 3 weeks ago
- A 3D interactivity toolbox for napari☆35Updated this week
- A napari plugin for zarr backed OME-NGFF images☆33Updated 3 weeks ago
- Experimental micro-service for implementing the Zarr spec over HTTP☆18Updated this week
- python tools for BigDataViewer☆22Updated 5 months ago
- A writer and reader for NGFF OME-Zarr datasets☆14Updated 3 years ago
- Python module for registering and fusing multi-view microscopy data☆23Updated 3 months ago
- Pydantic models for OME-NGFF☆24Updated this week
- Process images using SimpleITK in napari☆21Updated last month
- ☆12Updated 10 months ago
- ☆36Updated 2 weeks ago
- Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/☆11Updated 2 years ago
- A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)☆16Updated 2 weeks ago
- ☆21Updated last year
- BIOMERO - A python library for easy connecting between OMERO (jobs) and a Slurm cluster☆17Updated 2 months ago
- ☆21Updated this week
- ilastik plugin for napari☆14Updated last year
- ☆14Updated this week
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆22Updated 3 months ago
- ☆45Updated this week
- A multi-dimensional spatial image data structure for scientific Python.☆39Updated 2 months ago
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆42Updated 4 months ago
- Quickly find the affine matrix mapping one image to another using manual correspondence points annotation☆21Updated 2 months ago
- Fusing image tiles with dask array's map_blocks☆30Updated last year
- ☆25Updated last month
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 10 months ago
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆79Updated 2 weeks ago
- Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…☆29Updated 2 months ago
- A minimal Python package for reading OME-Zarr (meta)data☆31Updated 2 weeks ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆17Updated 2 months ago