abcucberkeley / cpp-zarr
☆13Updated this week
Related projects ⓘ
Alternatives and complementary repositories for cpp-zarr
- ☆27Updated 3 weeks ago
- A napari plugin for zarr backed OME-NGFF images☆28Updated 2 weeks ago
- A 3D interactivity toolbox for napari☆32Updated last month
- Pydantic models for OME-NGFF☆20Updated this week
- A writer and reader for NGFF OME-Zarr datasets☆14Updated 3 years ago
- python tools for BigDataViewer☆21Updated last year
- Parts list and build instructions for our high-numerical-aperture lightsheet. Read the publication here: https://andrewgyork.github.io/hi…☆22Updated 4 months ago
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆16Updated last week
- Experimental micro-service for implementing the Zarr spec over HTTP☆17Updated last month
- BIOMERO - A python library for easy connecting between OMERO (jobs) and a Slurm cluster☆13Updated 3 weeks ago
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆37Updated this week
- ☆20Updated 3 weeks ago
- ☆12Updated 2 months ago
- ☆19Updated last year
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated 2 months ago
- Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/☆11Updated last year
- GIve easy, high-level access to ome-zarr fileset☆13Updated 3 weeks ago
- ilastik plugin for napari☆13Updated 6 months ago
- Speed up coding/extending image analysis in Python.☆30Updated this week
- Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata☆29Updated this week
- Process images using SimpleITK in napari☆19Updated last month
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆56Updated this week
- A python library for advanced lattice light-sheet image analysis☆20Updated 4 years ago
- ☆29Updated 7 months ago
- Command-line client for Fractal☆45Updated this week
- A fully scalable robust image feature extraction library.☆19Updated last week
- Python module for registering and fusing multi-view microscopy data☆23Updated last year
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆39Updated this week
- Visualizing feature measurements on label images in napari☆10Updated 3 months ago
- Quickly find the affine matrix mapping one image to another using manual correspondence points annotation☆18Updated 4 months ago
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆11Updated 3 years ago