Alternatives and similar repositories for scifio-imageio:

Users that are interested in scifio-imageio are comparing it to the libraries listed below

• saalfeldlab / n5-viewer
  BigDataViewer-based tool for visualizing multichannel multiscale N5 datasets.
  ☆19Updated 3 weeks ago
• bigdataviewer / bigdataviewer-playground
  ☆19Updated 2 weeks ago
• PreibischLab / BigStitcher
  ImgLib2/BDV implementation of Stitching for large datasets
  ☆69Updated last week
• PreibischLab / multiview-simulation
  Code for simulating a multi-view acquisition including attenuation, convolution, reduced sampling and poission noise
  ☆12Updated 2 years ago
• imglib / imglib2-imglyb
  ☆18Updated 9 months ago
• mcib3d / mcib3d-core
  mcib3d core library for 3D ImageJ suite
  ☆13Updated 2 years ago
• apeer-micro / apeer-ometiff-library
  Easily read and write ome-tiff images in python
  ☆26Updated 9 months ago
• fiji / SPIM_Registration
  Deprecated, instead check out: https://github.com/preibischLab/multiview-reconstruction & https://github.com/PreibischLab/BigStitcher
  ☆23Updated 5 months ago
• imagej / ops-experiments
  EXPERIMENTAL repository for exploring Ops approaches, algorithms, etc.
  ☆19Updated 2 years ago
• BIOP / ijl-utilities-wrappers
  Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)
  ☆34Updated last month
• PreibischLab / multiview-reconstruction
  Software for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data
  ☆24Updated last week
• arttumiettinen / pi2
  C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.
  ☆54Updated 3 weeks ago
• SebastienTs / LOBSTER
  Little OBjects Segmentation and Tracking EnviRonment
  ☆9Updated 4 years ago
• saalfeldlab / n5-ij
  ImageJ convenience layer for N5
  ☆16Updated this week
• BIOP / qupath-extension-warpy
  ImgLib2 RealTransform brought to QuPath
  ☆21Updated 3 months ago
• bigdataviewer / bigdataviewer-vistools
  Helpers to use BigDataViewer as a quick visualization tool in other projects.
  ☆25Updated 8 months ago
• miura / ij_textbook2
  CMCI textbook 2, for ImageJ macro course
  ☆18Updated 7 years ago
• saalfeldlab / stitching-spark
  Reconstruct big images from overlapping tiled images on a Spark cluster.
  ☆35Updated last year
• ved-sharma / HyperStackReg
  An ImageJ/FIJI plugin for multi-channel Hyperstack alignment (registration)
  ☆12Updated 2 years ago
• SCIInstitute / fluorender
  FluoRender is an interactive tool for confocal microscopy data analysis.
  ☆42Updated this week
• bigdataviewer / bigdataviewer-core
  ImgLib2-based viewer for registered SPIM stacks and more
  ☆38Updated 2 months ago
• nvladimus / npy2bdv
  Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.
  ☆35Updated 5 months ago
• clij / clij-docs
  Online documentation and reference for CLIJ
  ☆28Updated 3 years ago
• BIOP / EasyXT-FIJI
  Commands and Classes for interfacing between Imaris and Fiji
  ☆12Updated 4 months ago
• svi-opensource / libics
  Image Cytometry Standard file reading and writing.
  ☆17Updated 5 months ago
• haesleinhuepf / imagejmacromarkdown
  Generate markdown notebooks from ImageJ Macro
  ☆24Updated 3 years ago
• haesleinhuepf / napari-script-editor
  A python script editor plugin for napari
  ☆11Updated last year
• guiwitz / napari_demo
  ☆22Updated 3 years ago
• BIOP / qupath-groovy-python-runner
  A proof of concept to run python segmentations and recovering the results within QuPath
  ☆19Updated 4 years ago
• constantinpape / pybdv
  python tools for BigDataViewer
  ☆21Updated last month