Alternatives and similar repositories for scifio-imageio:

Users that are interested in scifio-imageio are comparing it to the libraries listed below

• saalfeldlab / n5-viewer
  BigDataViewer-based tool for visualizing multichannel multiscale N5 datasets.
  ☆19Updated 2 months ago
• bigdataviewer / bigdataviewer-playground
  ☆19Updated this week
• PreibischLab / multiview-simulation
  Code for simulating a multi-view acquisition including attenuation, convolution, reduced sampling and poission noise
  ☆12Updated 2 years ago
• PreibischLab / BigStitcher
  ImgLib2/BDV implementation of Stitching for large datasets
  ☆73Updated last month
• guiwitz / napari_demo
  ☆22Updated 4 years ago
• bigdataviewer / bigdataviewer-core
  ImgLib2-based viewer for registered SPIM stacks and more
  ☆38Updated last week
• apeer-micro / apeer-ometiff-library
  Easily read and write ome-tiff images in python
  ☆26Updated 10 months ago
• imglib / imglib2-imglyb
  ☆18Updated 10 months ago
• haesleinhuepf / napari-script-editor
  A python script editor plugin for napari
  ☆11Updated last year
• ome / ome-model
  OME model (specification, code generator, implementation)
  ☆14Updated 3 weeks ago
• bigdataviewer / bigdataviewer-vistools
  Helpers to use BigDataViewer as a quick visualization tool in other projects.
  ☆25Updated 9 months ago
• saalfeldlab / stitching-spark
  Reconstruct big images from overlapping tiled images on a Spark cluster.
  ☆35Updated last year
• nvladimus / npy2bdv
  Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.
  ☆35Updated 7 months ago
• BIOP / qupath-groovy-python-runner
  A proof of concept to run python segmentations and recovering the results within QuPath
  ☆19Updated 4 years ago
• constantinpape / pybdv
  python tools for BigDataViewer
  ☆22Updated 3 months ago
• ome / ome2024-ngff-challenge
  Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data
  ☆19Updated 3 weeks ago
• miura / ij_textbook2
  CMCI textbook 2, for ImageJ macro course
  ☆18Updated 7 years ago
• mobie / mobie-viewer-fiji
  ☆35Updated this week
• fiji / SPIM_Registration
  Deprecated, instead check out: https://github.com/preibischLab/multiview-reconstruction & https://github.com/PreibischLab/BigStitcher
  ☆23Updated 7 months ago
• spatial-image / multiscale-spatial-image
  Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.
  ☆42Updated last month
• clij / clij-docs
  Online documentation and reference for CLIJ
  ☆28Updated 3 years ago
• NFDI4BIOIMAGE / training
  ☆14Updated this week
• BIOP / EasyXT-FIJI
  Commands and Classes for interfacing between Imaris and Fiji
  ☆12Updated 6 months ago
• svi-opensource / libics
  Image Cytometry Standard file reading and writing.
  ☆18Updated 6 months ago
• SebastienTs / LOBSTER
  Little OBjects Segmentation and Tracking EnviRonment
  ☆9Updated 4 years ago
• SCIInstitute / fluorender
  FluoRender is an interactive tool for confocal microscopy data analysis.
  ☆43Updated this week
• Euro-BioImaging / BatchConvert
  A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…
  ☆21Updated 2 weeks ago
• mcib3d / mcib3d-core
  mcib3d core library for 3D ImageJ suite
  ☆13Updated 2 years ago
• ome / omero-ms-zarr
  Experimental micro-service for implementing the Zarr spec over HTTP
  ☆18Updated last month
• aeisenbarth / ngff-writer
  A writer and reader for NGFF OME-Zarr datasets
  ☆14Updated 3 years ago