Alternatives and similar repositories for scifio-imageio

Users that are interested in scifio-imageio are comparing it to the libraries listed below

• saalfeldlab / n5-viewer
  BigDataViewer-based tool for visualizing multichannel multiscale N5 datasets.
  ☆19Updated last month
• PreibischLab / BigStitcher
  ImgLib2/BDV implementation of Stitching for large datasets
  ☆73Updated 2 weeks ago
• bigdataviewer / bigdataviewer-playground
  ☆20Updated last month
• apeer-micro / apeer-ometiff-library
  Easily read and write ome-tiff images in python
  ☆27Updated last year
• SCIInstitute / fluorender
  FluoRender is an interactive tool for confocal microscopy data analysis.
  ☆45Updated this week
• SebastienTs / LOBSTER
  Little OBjects Segmentation and Tracking EnviRonment
  ☆9Updated 4 years ago
• saalfeldlab / stitching-spark
  Reconstruct big images from overlapping tiled images on a Spark cluster.
  ☆35Updated last year
• mcib3d / mcib3d-core
  mcib3d core library for 3D ImageJ suite
  ☆14Updated 2 years ago
• constantinpape / pybdv
  python tools for BigDataViewer
  ☆22Updated 4 months ago
• imagej / ops-experiments
  EXPERIMENTAL repository for exploring Ops approaches, algorithms, etc.
  ☆19Updated 2 years ago
• guiwitz / napari_demo
  ☆22Updated 4 years ago
• haesleinhuepf / napari-script-editor
  A python script editor plugin for napari
  ☆11Updated last year
• imglib / imglib2-imglyb
  ☆18Updated last year
• ImageScience / FeatureJ
  ImageJ plugin suite for image feature extraction
  ☆10Updated 9 years ago
• SuperElastix / elastix-napari
  A napari plugin for itk-elastix
  ☆38Updated 11 months ago
• clij / clij-docs
  Online documentation and reference for CLIJ
  ☆28Updated 3 years ago
• nvladimus / npy2bdv
  Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.
  ☆35Updated 8 months ago
• PreibischLab / multiview-simulation
  Code for simulating a multi-view acquisition including attenuation, convolution, reduced sampling and poission noise
  ☆12Updated 2 years ago
• smithk / cidre
  A general illumination correction method for optical microscopy.
  ☆41Updated 3 years ago
• svi-opensource / libics
  Image Cytometry Standard file reading and writing.
  ☆18Updated 8 months ago
• ome / ome2024-ngff-challenge
  Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data
  ☆19Updated last month
• SWC-Advanced-Microscopy / StitchIt
  Stitching of large tiled datasets
  ☆20Updated last month
• clEsperanto / i2k2020_tutorial_clij_clesperanto
  ☆12Updated 4 years ago
• arttumiettinen / pi2
  C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.
  ☆54Updated last month
• QI2lab / OPM
  Archived: control, reconstruction, and analysis code for oblique plane microscopy.
  ☆22Updated last month
• imaris / ImarisWriter
  ☆36Updated last year
• allen-cell-animated / agave
  ☆41Updated this week
• saalfeldlab / n5-ij
  ImageJ convenience layer for N5
  ☆17Updated this week
• haesleinhuepf / apoc
  Accelerated Pixel and Object Classifiers (APOC)
  ☆57Updated 3 months ago
• fiji / SPIM_Registration
  Deprecated, instead check out: https://github.com/preibischLab/multiview-reconstruction & https://github.com/PreibischLab/BigStitcher
  ☆23Updated 8 months ago