Alternatives and similar repositories for depiction

Users that are interested in depiction are comparing it to the libraries listed below

• HallLab / pandas-genomics
  Pandas ExtensionDtypes for dealing with genomics data
  ☆47Updated 3 months ago
• leriomaggio / deep-learning-health-life-sciences
  Workshop on Deep Learning for Health and Life Sciences
  ☆15Updated 2 years ago
• kipoi / models
  Model zoo for genomics
  ☆168Updated last year
• BIMSBbioinfo / maui
  Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit
  ☆49Updated 2 years ago
• budach / pysster
  pysster: Learning Sequence And Structure Motifs In Biological Sequences Using Convolutional Neural Networks
  ☆86Updated 5 years ago
• YeoLab / anchor
  Find bimodal, unimodal, and multimodal features in your data
  ☆27Updated 6 years ago
• kylessmith / dynamicTreeCut
  Python translation of the hybrid dynamicTreeCut method as created by Peter Langfelder and Bin Zhang.
  ☆40Updated 4 years ago
• p-koo / deepomics
  deep learning toolkit (written on top of tensorflow) to streamline computational biology analysis
  ☆22Updated 2 years ago
• Pex2892 / PETAL
  PETAL (ParallEl paThways AnaLyzer): a Python tool for deep biological pathway analysis
  ☆35Updated 2 years ago
• unlearnai / genemunge
  Tools for munging genomic data
  ☆21Updated 6 years ago
• greenelab / DAPS
  Denoising Autoencoders for Phenotype Stratification
  ☆41Updated 6 years ago
• mickaelleclercq / BioDiscML
  Large-scale automatic feature selection for biomarker discovery in high-dimensional OMICs data
  ☆31Updated 2 months ago
• kundajelab / genomelake
  Simple and efficient access to genomic data for deep learning models.
  ☆42Updated 5 years ago
• jmschrei / avocado
  Avocado is a multi-scale deep tensor factorization model that learns a latent representation of the human epigenome and enables imputatio…
  ☆119Updated 3 years ago
• TeoSakel / deep-drug-response
  ☆19Updated 4 years ago
• gokceneraslan / dnaconvnet-notebook
  Jupyter notebook for the application of convolutional neural nets to toy DNA sequence data
  ☆15Updated 4 years ago
• greenelab / multi-plier
  An unsupervised transfer learning approach for rare disease transcriptomics
  ☆45Updated 5 years ago
• QData / AttentiveChrome
  NeurIPS17: [AttentiveChrome] Attend and Predict: Using Deep Attention Model to Understand Gene Regulation by Selective Attention on Chrom…
  ☆27Updated 4 years ago
• QData / DeepChrome
  Bioinformatics16: DeepChrome: Deep-learning for predicting gene expression from histone modifications
  ☆63Updated 4 years ago
• BenjaminDoran / unidip
  Python port of the Unidip clustering algorithm from: http://www.kdd.org/kdd2016/subtopic/view/skinny-dip-clustering-in-a-sea-of-noise
  ☆37Updated 2 years ago
• cytodata / cytodata-hackathon-2018
  Ideas, code and results of the 2018 CytoData hackathon
  ☆12Updated last year
• kundajelab / cs273b
  CS273B Deep Learning for Genomics Course Materials
  ☆34Updated 5 years ago
• kipoi / kipoi
  Kipoi's model zoo API
  ☆238Updated last year
• kheyer / Genomic-ULMFiT
  ULMFiT for Genomic Sequence Data
  ☆286Updated 5 years ago
• mims-harvard / pathways
  Disease pathways in the human interactome
  ☆23Updated 7 years ago
• willtownes / glmpca-py
  generalized principal component analysis (GLM-PCA) implemented in python
  ☆59Updated 4 years ago
• omiq-ai / Multicore-opt-SNE
  Parallel opt-SNE implementation with Python wrapper
  ☆37Updated 3 years ago
• greenelab / BioBombe
  BioBombe: Sequentially compressed gene expression features enhances biological signatures
  ☆66Updated last year
• tlatkowski / deep-learning-gene-expression
  Deep learning methods for feature selection in gene expression autism data.
  ☆36Updated 3 years ago
• NikolayOskolkov / tSNE_vs_UMAP_GlobalStructure
  Here we address the global structure preservation by tSNE and UMAP
  ☆47Updated 5 years ago