IBM / depictionLinks
interpret deep learning models in a framework-independent fashion
☆41Updated 4 months ago
Alternatives and similar repositories for depiction
Users that are interested in depiction are comparing it to the libraries listed below
Sorting:
- Pandas ExtensionDtypes for dealing with genomics data☆47Updated 7 months ago
- Find bimodal, unimodal, and multimodal features in your data☆27Updated 7 years ago
- Workshop on Deep Learning for Health and Life Sciences☆16Updated 2 years ago
- Model zoo for genomics☆173Updated last month
- pysster: Learning Sequence And Structure Motifs In Biological Sequences Using Convolutional Neural Networks☆86Updated 6 years ago
- Denoising Autoencoders for Phenotype Stratification☆42Updated 7 years ago
- Tools for munging genomic data☆21Updated 6 years ago
- Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit☆50Updated 2 years ago
- Large-scale automatic feature selection for biomarker discovery in high-dimensional OMICs data☆32Updated 6 months ago
- deep learning toolkit (written on top of tensorflow) to streamline computational biology analysis☆22Updated 2 years ago
- Avocado is a multi-scale deep tensor factorization model that learns a latent representation of the human epigenome and enables imputatio…☆120Updated 3 years ago
- Code sharing related to DREAM challenges☆24Updated 8 years ago
- Simple and efficient access to genomic data for deep learning models.☆42Updated 6 years ago
- EmbedGEM: A framework to evaluate the utility of embeddings for genetic discovery☆22Updated last year
- Hetnets in Python (relocated from dhimmel/hetio)☆101Updated 4 months ago
- Pandas DataFrames for phylogenetics☆74Updated 4 years ago
- Python translation of the hybrid dynamicTreeCut method as created by Peter Langfelder and Bin Zhang.☆41Updated 4 years ago
- Deep learning infrastructure for genomics☆257Updated 4 years ago
- ULMFiT for Genomic Sequence Data☆286Updated 6 years ago
- Kipoi's model zoo API☆240Updated last month
- Python API for Genomic Data Commons☆20Updated 9 years ago
- ☆56Updated last year
- PETAL (ParallEl paThways AnaLyzer): a Python tool for deep biological pathway analysis☆37Updated 3 years ago
- NeurIPS17: [AttentiveChrome] Attend and Predict: Using Deep Attention Model to Understand Gene Regulation by Selective Attention on Chrom…☆27Updated 4 years ago
- Python Wrapper for FIt-SNE☆45Updated 4 years ago
- BioBombe: Sequentially compressed gene expression features enhances biological signatures☆65Updated last year
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆68Updated 2 weeks ago
- Bioinformatics in Python☆58Updated last year
- An unsupervised transfer learning approach for rare disease transcriptomics☆46Updated 5 years ago
- Python port of the Unidip clustering algorithm from: http://www.kdd.org/kdd2016/subtopic/view/skinny-dip-clustering-in-a-sea-of-noise☆37Updated 2 years ago