Find bimodal, unimodal, and multimodal features in your data
☆27Oct 26, 2018Updated 7 years ago
Alternatives and similar repositories for anchor
Users that are interested in anchor are comparing it to the libraries listed below
Sorting:
- A scientific publication, describing a way to improve microscopy. This repository hosts everything you need to reproduce our results. Rea…☆13Jun 22, 2024Updated last year
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆18Mar 5, 2019Updated 7 years ago
- Command line tools for IntSpan related bioinformatics operations☆12Apr 9, 2025Updated 11 months ago
- Examples of kallisto + sleuth☆11May 18, 2017Updated 8 years ago
- python (cython) wrapper for https://github.com/ryanlayer/giggle for fast interval searching of huge datasets.☆15Feb 13, 2018Updated 8 years ago
- robust matching of small variant datasets using flexible scoring schemes☆11Mar 26, 2020Updated 5 years ago
- ☆15Jun 3, 2025Updated 9 months ago
- R package - Analysis of Single Cell Expression, Normalisation and Differential expression (ascend)☆22Aug 28, 2019Updated 6 years ago
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Sep 20, 2023Updated 2 years ago
- ☆20Sep 28, 2019Updated 6 years ago
- Code and figures accompanying the paper, "Single-cell alternative splicing analysis with Expedition reveals splicing dynamics during neu…☆20Jun 28, 2017Updated 8 years ago
- SCOUP is a probabilistic model to analyze single-cell expression data during differentiation☆10Apr 20, 2017Updated 8 years ago
- Introduction to Python Programming☆11Mar 31, 2020Updated 5 years ago
- Things we use regularly☆29Aug 5, 2025Updated 7 months ago
- An R Interface to Large Language Models☆27Sep 21, 2025Updated 6 months ago
- a toolbox for metabolomic data analysis, visualization and ‘omic’ integration☆13Jun 21, 2018Updated 7 years ago
- An interface for Nested Stochastic Block Model for single cell analysis☆37Sep 30, 2025Updated 5 months ago
- Code for simulating a multi-view acquisition including attenuation, convolution, reduced sampling and poission noise☆13Jun 14, 2022Updated 3 years ago
- Biclustering algorithm☆58Dec 11, 2017Updated 8 years ago
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆39Jan 30, 2024Updated 2 years ago
- Assembles a graph manifold from time series single-cell RNAseq data☆18May 11, 2021Updated 4 years ago
- LAAVA: Long-read AAV Analysis☆13Dec 9, 2025Updated 3 months ago
- My configuration files on macOS☆11Jan 27, 2026Updated last month
- Lab notebook for people who like the command line.☆11Mar 6, 2026Updated 2 weeks ago
- Quantitative analysis of cell motility behaviors☆13Feb 21, 2025Updated last year
- Single Cell RNA-seq UMI Filtering Facilitator☆10Oct 6, 2025Updated 5 months ago
- A Shiny-based framework to analyze and visualize interactively genomic data☆11May 11, 2023Updated 2 years ago
- Parts list and build instructions for our high-numerical-aperture lightsheet. Read the publication here: https://andrewgyork.github.io/hi…☆22Jun 21, 2024Updated last year
- Tool to encode/decode .ipynb into .py files.☆17Jan 27, 2026Updated last month
- ☆10Jan 19, 2019Updated 7 years ago
- R interface to megadepth: BigWig and BAM related utilities☆13Dec 12, 2024Updated last year
- Single-cell RNA-seq Gene Expression Recovery☆114Nov 28, 2024Updated last year
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Jul 5, 2021Updated 4 years ago
- Model-based analysis of APA using 3' end-linked reads☆12Aug 14, 2021Updated 4 years ago
- A small, auxiliary index to massively improve parallel fastq parsing☆31Mar 6, 2026Updated 2 weeks ago
- ☆20Mar 28, 2017Updated 8 years ago
- Detection of structural variants in cancer mate-pair and paired-end data☆13May 3, 2019Updated 6 years ago
- Robust individual and aggregate checksums for nucleotide sequences☆17Mar 3, 2026Updated 2 weeks ago
- Code accompanying "Prospective identification of hematopoietic lineage choice by deep learning", Nature methods 2017, DOI:10.1038/nmeth.4…☆21Dec 18, 2025Updated 3 months ago