Alternatives and similar repositories for appyter

Users that are interested in appyter are comparing it to the libraries listed below

• hammerlab / cohorts
  Utilities for analyzing mutations and neoepitopes in patient cohorts
  ☆20Updated 7 years ago
• hammerlab / t-cell-relation-extraction
  Literature mining for T cell relations
  ☆23Updated 3 years ago
• Shamir-Lab / NEMO
  ☆17Updated 5 years ago
• gmiaslab / pyiomica
  PyIOmica (pyiomica) is a Python package for omics analyses.
  ☆16Updated 4 months ago
• biohackathons / biohackathons.github.io
  International BioHackathon Directory of Events, Projects and Communities
  ☆12Updated last week
• genepattern / genepattern-notebook
  Platform for integrating genomic analysis with Jupyter Notebooks.
  ☆44Updated 6 months ago
• JonnyTran / OpenOmics
  A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.
  ☆36Updated last year
• biothings / biothings.api
  BioThings API framework - Making high-performance API for biological annotation data
  ☆50Updated this week
• unlearnai / genemunge
  Tools for munging genomic data
  ☆21Updated 6 years ago
• Clinical-Genomics / patientMatcher
  A MatchMaker Exchange server
  ☆12Updated 6 months ago
• PathwayCommons / factoid
  A project to capture biological pathway data from academic papers
  ☆29Updated 10 months ago
• bio2bel / bio2bel
  A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)
  ☆21Updated 4 years ago
• flo-compbio / monet
  Monet: An open-source Python package for analyzing scRNA-Seq data using PCA-based latent spaces
  ☆40Updated 4 years ago
• ismms-himc / codex_dashboard
  Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Data
  ☆17Updated 2 years ago
• hetio / xswap
  Python library (C++ backend) for degree-preserving network randomization
  ☆14Updated 6 years ago
• viash-io / viash
  script + metadata = standalone component
  ☆44Updated last month
• biopragmatics / bioversions
  🪝 What's the latest version for each database?
  ☆28Updated last week
• datarail / gr_metrics
  ☆15Updated 2 years ago
• muccg / mastr-ms
  Metabolomics experimental design, sample metadata configuration, and sample data acquisition.
  ☆11Updated 7 years ago
• bio2bel / drugbank
  A Bio2BEL package for DrugBank (https://www.drugbank.ca)
  ☆10Updated 5 years ago
• NCBI-Hackathons / PrecisionMedicineToolkit
  Search public databases for given genotypic information
  ☆11Updated 7 years ago
• YeoLab / qtools
  qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python
  ☆21Updated 2 years ago
• biolab / orange3-single-cell
  🍊🔬 Orange add-on for gene expression of single cell data
  ☆17Updated 2 months ago
• emreg00 / repurpose
  Reproducible drug repurposing: a Python-based framework for building drug-disease association classifiers
  ☆17Updated 7 years ago
• opentargets / stopReasons
  Analysis on stop reasons
  ☆10Updated last year
• benchling / integration-examples
  Example usage of the Benchling API: https://docs.benchling.com/
  ☆35Updated 7 months ago
• Stemanz / restring
  Functional enrichment terms aggregator
  ☆18Updated last year
• greenelab / multi-plier
  An unsupervised transfer learning approach for rare disease transcriptomics
  ☆46Updated 6 years ago
• dhimmel / integrate
  Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing
  ☆33Updated 8 years ago
• pamelarussell / github-bioinformatics
  Code for Russell et al. "A large-scale analysis of bioinformatics code on GitHub"
  ☆34Updated 6 years ago