kheyer / Genomic-ULMFiTLinks
ULMFiT for Genomic Sequence Data
☆286Updated 5 years ago
Alternatives and similar repositories for Genomic-ULMFiT
Users that are interested in Genomic-ULMFiT are comparing it to the libraries listed below
Sorting:
- a framework for training sequence-level deep learning networks☆385Updated 9 months ago
- Kipoi's model zoo API☆238Updated last year
- Official code repository of "BERTology Meets Biology: Interpreting Attention in Protein Language Models."☆301Updated 4 months ago
- interpret deep learning models in a framework-independent fashion☆41Updated 4 months ago
- Model zoo for genomics☆168Updated last year
- Deep learning infrastructure for genomics☆257Updated 3 years ago
- dna2vec: Consistent vector representations of variable-length k-mers☆189Updated 3 years ago
- Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different dom…☆120Updated 4 years ago
- MiniFold: Deep Learning for Protein Structure Prediction inspired by DeepMind AlphaFold algorithm☆211Updated 4 years ago
- Contains files for the deep learning in genomics primer.☆266Updated 6 years ago
- A hybrid convolutional and recurrent neural network for predicting the function of DNA sequences☆158Updated 8 years ago
- Ten Quick Tips for Deep Learning in Biology☆226Updated 3 years ago
- The need to understand cell developmental processes has spawned a plethora of computational methods for discovering hierarchies from scRN…☆150Updated 4 years ago
- Training and evaluating a variational autoencoder for pan-cancer gene expression data☆172Updated 6 years ago
- pysster: Learning Sequence And Structure Motifs In Biological Sequences Using Convolutional Neural Networks☆86Updated 5 years ago
- Bioinformatics16: DeepChrome: Deep-learning for predicting gene expression from histone modifications☆63Updated 4 years ago
- Towards Gene Expression Convolutions using Gene Interaction Graphs☆75Updated 3 years ago
- ☆34Updated 3 years ago
- ☆264Updated 5 years ago
- DeepRC: Immune repertoire classification with attention-based deep massive multiple instance learning☆119Updated 2 years ago
- A toolkit to learn how to model and interpret regulatory sequence data using deep learning.☆262Updated 2 years ago
- Dimensionality reduction in very large datasets using Siamese Networks☆338Updated 11 months ago
- AI/ML citation graph with postgres + graphql☆188Updated 5 years ago
- Deep neural networks for predicting CpG methylation☆148Updated 5 years ago
- DCell browser and gene deletion simulator☆123Updated 2 years ago
- End-to-end guide design for CRISPR/Cas9 with machine learning☆134Updated 2 years ago
- The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell lev…☆179Updated 2 years ago
- Training and testing of DeepBind models.☆98Updated 9 years ago
- A Curated List of Computational Biology Datasets Suitable for Machine Learning☆183Updated last year
- Python/Keras implementation of integrated gradients presented in "Axiomatic Attribution for Deep Networks" for explaining any model defin…☆217Updated 7 years ago