An experimental deep learning & genotype network-based system for predicting new influenza protein sequences.
☆36Aug 23, 2023Updated 3 years ago
Alternatives and similar repositories for flu-sequence-predictor
Users that are interested in flu-sequence-predictor are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Predicting Future Influenza Virus Sequences with Machine Learning☆32Feb 11, 2018Updated 8 years ago
- Integrating influenza antigenic dynamics with molecular evolution☆12May 28, 2015Updated 11 years ago
- Create modular models. Quickly prototype models whose input includes (multiple) time series data. Create pieces of model use cases separa…☆12Nov 1, 2019Updated 6 years ago
- An R package containing functions used in the CDC Flu Forecasting competition☆11Oct 18, 2020Updated 6 years ago
- ☆11Jun 23, 2017Updated 9 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆11Apr 17, 2023Updated 3 years ago
- Code for reconstructing influenza dynamics from surveillance data using evidence synthesis techniques☆22Apr 26, 2022Updated 4 years ago
- Nextstrain build for avian influenza viruses☆29Oct 15, 2026Updated 2 weeks ago
- Phylogenetic pathway–dependent recognition of fixed substitutions and parallel mutations☆11Sep 18, 2025Updated last year
- An R package for the analysis of infectious disease transmission data☆10Nov 8, 2021Updated 4 years ago
- Influenza forecasts visualizer☆44Aug 14, 2026Updated 2 months ago
- Shiny based data explorer with report templates based on field selection☆11Oct 27, 2015Updated 11 years ago
- SLIP is a sandbox environment for engineering protein sequences with synthetic fitness functions.☆20Updated this week
- Guidelines and forecasts for a collaborative U.S. influenza forecasting project.☆39May 4, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Python Essentials for Biomedical Data Analysis: An Introductory Guide☆15Aug 14, 2025Updated last year
- A collection of Python modules equivalent to R ReQTL Toolkit aims to identify the association between expressed SNVs with their gene expr…☆11Jan 20, 2022Updated 4 years ago
- Inferring spatiotemporal dynamics of the H1N1 influenza pandemic from sequence data☆34Oct 25, 2013Updated 13 years ago
- Pipeline for Illumina shotgun sequencing of 16S rRNA amplicon sequences☆14Sep 2, 2016Updated 10 years ago
- Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)☆23Oct 27, 2020Updated 6 years ago
- A tool for running bioinformatics workflows locally or in the cloud.☆30Dec 13, 2019Updated 6 years ago
- R package for statistical inference of spatiotemporal partially observed Markov processes☆13Dec 21, 2024Updated last year
- ☆13Aug 20, 2025Updated last year
- The Zika bioinformatics pipeline☆37Mar 29, 2020Updated 6 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Jupyter notebooks and code for Intro to DL talk at Genesys☆14Aug 14, 2016Updated 10 years ago
- This is a R package for alignment of DIA mass-spec data☆12Jan 31, 2026Updated 9 months ago
- A basic cli tool for downloading all the enrolled courses from udemy account☆12Dec 14, 2019Updated 6 years ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequences☆24Updated this week
- Gromacs molecular dynamics simulation analysis scripts☆10Apr 5, 2022Updated 4 years ago
- Influenza genome analysis Nextflow workflow☆28Jun 3, 2026Updated 4 months ago
- Genetics training camp☆21Sep 8, 2020Updated 6 years ago
- Software to process, statistically analyse and visualise deep mutational scanning data☆14Aug 3, 2026Updated 2 months ago
- Materials and Jekyll website for the Wednesday software working group.☆10Feb 17, 2017Updated 9 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆11Jul 13, 2018Updated 8 years ago
- PyTorch bindings for openai-gemm☆20Feb 6, 2017Updated 9 years ago
- ☆10Apr 12, 2023Updated 3 years ago
- R package for generating beautiful and customizable plots for the exons and introns of any gene☆12Jul 26, 2021Updated 5 years ago
- ☆22Jul 14, 2023Updated 3 years ago
- Quality control for phylogenetic analyses☆13Oct 19, 2026Updated last week
- Static website generator for sciencey people☆30Feb 7, 2024Updated 2 years ago