Alternatives and similar repositories for kopt:

Users that are interested in kopt are comparing it to the libraries listed below

• KlugerLab / pyFIt-SNE
  Python Wrapper for FIt-SNE
  ☆45Updated 3 years ago
• YeoLab / anchor
  Find bimodal, unimodal, and multimodal features in your data
  ☆27Updated 6 years ago
• IBM / depiction
  interpret deep learning models in a framework-independent fashion
  ☆41Updated last year
• budach / pysster
  pysster: Learning Sequence And Structure Motifs In Biological Sequences Using Convolutional Neural Networks
  ☆86Updated 5 years ago
• EpistasisLab / scikit-mdr
  A sklearn-compatible Python implementation of Multifactor Dimensionality Reduction (MDR) for feature construction.
  ☆125Updated last year
• kundajelab / cs273b
  CS273B Deep Learning for Genomics Course Materials
  ☆33Updated 4 years ago
• snakers4 / playing_with_vae
  Comparing FC VAE / FCN VAE / PCA / UMAP on MNIST / FMNIST
  ☆61Updated 6 years ago
• p-koo / deepomics
  deep learning toolkit (written on top of tensorflow) to streamline computational biology analysis
  ☆23Updated 2 years ago
• okraus / DeepLoc
  This repository contains the code, and access to the pretrained models and datasets for the paper: "Automated analysis of high-content mi…
  ☆50Updated 7 years ago
• shibuiwilliam / keras_gpyopt
  Using Bayesian Optimization to optimize hyper parameter in Keras-made neural network model.
  ☆57Updated 7 years ago
• QData / DeepMotif
  Deep Motif (ICLR16)/ Deep Motif Dashboard (PSB17): Visualizing Genomic Sequence Classifications
  ☆46Updated 5 years ago
• thuijskens / scikit-hyperband
  A scikit-learn compatible implementation of hyperband
  ☆76Updated 5 years ago
• berenslab / rna-seq-tsne
  The art of using t-SNE for single-cell transcriptomics
  ☆122Updated 3 months ago
• mstrazar / iONMF
  Integrative orthogonal non-negative matrix factorization
  ☆31Updated 5 years ago
• wang-research / VASC
  Variational autoencoder for single cell RNA-seq datasets
  ☆44Updated 7 years ago
• KrishnaswamyLab / SAUCIE
  ☆98Updated 5 months ago
• irashavitt / regularization_learning_networks
  Implementation of RLNs, as described in https://arxiv.org/abs/1805.06440
  ☆35Updated 6 years ago
• adri-romsor / DietNetworks
  ☆34Updated 7 years ago
• alimirzaei / TSFS
  Deep Feature Selection using Teacher Student Network
  ☆43Updated 5 years ago
• greenelab / adage
  Data and code related to the paper "ADAGE-Based Integration of Publicly Available Pseudomonas aeruginosa..." Jie Tan, et al · mSystems · …
  ☆61Updated 8 years ago
• kylessmith / dynamicTreeCut
  Python translation of the hybrid dynamicTreeCut method as created by Peter Langfelder and Bin Zhang.
  ☆40Updated 3 years ago
• luslab / arshamg-scrnaseq-wgan
  Wasserstein Generative Adversarial Network for analysing scRNAseq data
  ☆34Updated 4 years ago
• theislab / deepflow
  This code contains the neural network implementation from the nature communication manuscript NCOMMS-16-25447A.
  ☆31Updated 7 years ago
• uci-cbcl / FactorNet
  A deep learning package for predicting TF binding
  ☆42Updated 5 years ago
• willtownes / glmpca-py
  generalized principal component analysis (GLM-PCA) implemented in python
  ☆59Updated 4 years ago
• isaacrob / treesne
  ☆63Updated 5 years ago
• omiq-ai / Multicore-opt-SNE
  Parallel opt-SNE implementation with Python wrapper
  ☆37Updated 2 years ago
• ppsp-team / StratiPy
  Graph regularized nonnegative matrix factorization (GNMF) in Python
  ☆45Updated 4 years ago
• sramirez / fast-mRMR
  An improved implementation of the classical feature selection method: minimum Redundancy and Maximum Relevance (mRMR).
  ☆83Updated 2 years ago
• mila-iqia / gene-graph-conv
  Towards Gene Expression Convolutions using Gene Interaction Graphs
  ☆74Updated 3 years ago