Alternatives and similar repositories for kopt:

Users that are interested in kopt are comparing it to the libraries listed below

• EpistasisLab / scikit-mdr
  A sklearn-compatible Python implementation of Multifactor Dimensionality Reduction (MDR) for feature construction.
  ☆125Updated last year
• KlugerLab / pyFIt-SNE
  Python Wrapper for FIt-SNE
  ☆45Updated 3 years ago
• YeoLab / anchor
  Find bimodal, unimodal, and multimodal features in your data
  ☆27Updated 6 years ago
• okraus / DeepLoc
  This repository contains the code, and access to the pretrained models and datasets for the paper: "Automated analysis of high-content mi…
  ☆50Updated 7 years ago
• budach / pysster
  pysster: Learning Sequence And Structure Motifs In Biological Sequences Using Convolutional Neural Networks
  ☆86Updated 5 years ago
• irashavitt / regularization_learning_networks
  Implementation of RLNs, as described in https://arxiv.org/abs/1805.06440
  ☆35Updated 6 years ago
• ppsp-team / StratiPy
  Graph regularized nonnegative matrix factorization (GNMF) in Python
  ☆45Updated 5 years ago
• snakers4 / playing_with_vae
  Comparing FC VAE / FCN VAE / PCA / UMAP on MNIST / FMNIST
  ☆64Updated 6 years ago
• NikolayOskolkov / HowUMAPWorks
  Here I explain the math behind UMAP and show how to program it from scratch in Python
  ☆38Updated 4 years ago
• rafaelvalle / MDI
  Missing Data Imputation Python Library
  ☆35Updated 5 years ago
• gokceneraslan / neuralnet_countmodels
  Count models with TensorFlow and Keras
  ☆47Updated 6 years ago
• broadinstitute / dsde-deep-learning
  DSDE Deep Learning Club
  ☆40Updated 6 years ago
• p-koo / deepomics
  deep learning toolkit (written on top of tensorflow) to streamline computational biology analysis
  ☆23Updated 2 years ago
• greenelab / DAPS
  Denoising Autoencoders for Phenotype Stratification
  ☆41Updated 6 years ago
• QData / DeepChrome
  Bioinformatics16: DeepChrome: Deep-learning for predicting gene expression from histone modifications
  ☆63Updated 4 years ago
• alimirzaei / TSFS
  Deep Feature Selection using Teacher Student Network
  ☆43Updated 5 years ago
• kundajelab / cs273b
  CS273B Deep Learning for Genomics Course Materials
  ☆34Updated 4 years ago
• QData / AttentiveChrome
  NeurIPS17: [AttentiveChrome] Attend and Predict: Using Deep Attention Model to Understand Gene Regulation by Selective Attention on Chrom…
  ☆27Updated 4 years ago
• shibuiwilliam / keras_gpyopt
  Using Bayesian Optimization to optimize hyper parameter in Keras-made neural network model.
  ☆57Updated 7 years ago
• mstrazar / iONMF
  Integrative orthogonal non-negative matrix factorization
  ☆31Updated 5 years ago
• kundajelab / genomelake
  Simple and efficient access to genomic data for deep learning models.
  ☆43Updated 5 years ago
• Vooban / Hyperopt-Keras-CNN-CIFAR-100
  Auto-optimizing a neural net (and its architecture) on the CIFAR-100 dataset. Could be easily transferred to another dataset or another c…
  ☆144Updated 2 years ago
• kundajelab / dfim
  Deep Feature Interaction Maps (DFIM)
  ☆53Updated 6 years ago
• KrishnaswamyLab / SAUCIE
  ☆98Updated 6 months ago
• omiq-ai / Multicore-opt-SNE
  Parallel opt-SNE implementation with Python wrapper
  ☆37Updated 2 years ago
• wenjiegroup / PEDLA
  PEDLA: predicting enhancers with deep learning-based algorithmic framework
  ☆16Updated 9 years ago
• uci-cbcl / DanQ
  A hybrid convolutional and recurrent neural network for predicting the function of DNA sequences
  ☆159Updated 8 years ago
• wang-research / VASC
  Variational autoencoder for single cell RNA-seq datasets
  ☆44Updated 7 years ago
• kipoi / models
  Model zoo for genomics
  ☆166Updated 8 months ago
• dkobak / finer-tsne
  Code for the paper on t-SNE with variable degree of freedom
  ☆24Updated 4 years ago