workflow used to prepare PPB-Affinity database
☆33Aug 22, 2024Updated last year
Alternatives and similar repositories for PPB-Affinity-DataPrepWorkflow
Users that are interested in PPB-Affinity-DataPrepWorkflow are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Baseline model for PPB-Affinity benchmark data☆43May 21, 2025Updated last year
- AbEpiTope-1.0 is a computational tool that features two scores: AbEpiScore-1.0, designed for assessing the accuracy of modelled AbAg inte…☆32Jun 23, 2026Updated last week
- Code for the paper "OneProt: Towards Multi-Modal Protein Foundation Models"☆23Oct 31, 2025Updated 8 months ago
- ☆13Sep 21, 2023Updated 2 years ago
- Protein-Protein Language Model with Novel Attention Mechanisms for Enhanced Inter-Protein Contact and Interaction Prediction☆59Jun 17, 2026Updated 2 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- NeurIPS 2024 Dataset and Benchmark Submission "AsEP: Benchmarking Deep Learning Methods for Antibody-specific Epitope Prediction"☆35Aug 12, 2024Updated last year
- Extension of ThermoMPNN for double mutant predictions☆63Mar 23, 2026Updated 3 months ago
- ☆19May 16, 2026Updated last month
- [Bioinformatics 2025] Official implementation of the paper "ParaSurf: A Surface-Based Deep Learning Approach for Paratope-Antigen Interac…☆29Jan 28, 2026Updated 5 months ago
- ☆42Jul 28, 2025Updated 11 months ago
- ☆10Mar 10, 2023Updated 3 years ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆75Jul 2, 2025Updated last year
- ☆31Aug 16, 2025Updated 10 months ago
- Deep learning tools for peptide substrate prediction and generation☆44Nov 20, 2025Updated 7 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Polyreactivity Website☆23Jun 26, 2023Updated 3 years ago
- Pretrainable geometric graph neural network for antibody affinity maturation☆79Mar 18, 2025Updated last year
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆61Oct 25, 2023Updated 2 years ago
- Protein Design with Guided Discrete Diffusion☆143Feb 21, 2024Updated 2 years ago
- random colab notebooks for biology☆26Aug 23, 2025Updated 10 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆64May 21, 2025Updated last year
- ☆15Jun 3, 2025Updated last year
- ☆30Aug 26, 2025Updated 10 months ago
- ☆59Sep 12, 2025Updated 9 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- open source repository☆148Nov 30, 2023Updated 2 years ago
- ☆10Oct 31, 2025Updated 8 months ago
- ☆21Mar 20, 2025Updated last year
- A command-line interface and Python library for generating AlphaFold3 input files.☆41Jan 2, 2026Updated 6 months ago
- Generative diverse protein backbones by protein language model☆35Feb 27, 2026Updated 4 months ago
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆63Feb 3, 2026Updated 5 months ago
- Transfer learning for Mutation Effect Prediction☆17Feb 13, 2024Updated 2 years ago
- A Fast, Simplified Model for Molecular Generation with Improved Physical Quality☆28Oct 1, 2025Updated 9 months ago
- A benchmark for comprehensive evaluation on protein structure tokenization methods☆56Aug 2, 2025Updated 11 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Deep reinforcement learning for protein complex modeling☆11May 28, 2022Updated 4 years ago
- A benchmark for 3D biomolecular structure prediction models☆69May 11, 2025Updated last year
- DeepAAI☆36Dec 25, 2024Updated last year
- Rank binders by structure modeling☆17Apr 10, 2026Updated 2 months ago
- ☆26Apr 26, 2023Updated 3 years ago
- ☆18Dec 23, 2024Updated last year
- Diffusion model based protein-ligand flexible docking method☆117Oct 30, 2024Updated last year