biochunan / AsEP-datasetLinks
NeurIPS 2024 Dataset and Benchmark Submission "AsEP: Benchmarking Deep Learning Methods for Antibody-specific Epitope Prediction"
☆26Updated 11 months ago
Alternatives and similar repositories for AsEP-dataset
Users that are interested in AsEP-dataset are comparing it to the libraries listed below
Sorting:
- Generative Language Modeling for Antibody Design☆159Updated 10 months ago
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆102Updated 10 months ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆114Updated 5 months ago
- ☆130Updated 2 years ago
- [ICLR2025] Official Implementation of IgGM: A Generative Model for Functional Antibody and Nanobody Design☆75Updated 3 months ago
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆80Updated last year
- ☆106Updated 2 years ago
- ☆130Updated last month
- ☆40Updated last year
- The Enhanced Database of Interacting Protein Structures for Interface Prediction☆49Updated last year
- ☆106Updated 2 months ago
- Database of Interacting Protein Structures (DIPS)☆102Updated last year
- Dataset and package for working with protein-protein interactions in 3D☆94Updated 3 months ago
- Official repository of EnzymeFlow☆92Updated 8 months ago
- ☆198Updated 10 months ago
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆139Updated last month
- open source repository☆139Updated last year
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆77Updated last year
- Official repository of ReactZyme☆36Updated 9 months ago
- Geometric Vector Perceptron --- a rotation-equivariant GNN for learning from biomolecular structure☆148Updated 4 years ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆116Updated 4 months ago
- LM-GVP: A Generalizable Deep Learning Framework for Protein Property Prediction from Sequence and Structure☆58Updated last year
- AbLang: A language model for antibodies☆144Updated last year
- ☆112Updated last year
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆131Updated 3 months ago
- Masif seed paper repository☆156Updated 2 years ago
- Implementation of DiffDock-PP: Rigid Protein-Protein Docking with Diffusion Models in PyTorch (ICLR 2023 - MLDD Workshop)☆212Updated last year
- The first large protein language model trained follows structure instructions.☆84Updated 2 months ago
- Antibody-Antigen Docking and Affinity Benchmark☆73Updated 4 years ago
- RNAFlow: RNA Structure & Sequence Design via Inverse Folding-Based Flow Matching☆65Updated 11 months ago