Alternatives and similar repositories for AsEP-dataset

Users that are interested in AsEP-dataset are comparing it to the libraries listed below

• ProteinDesignLab / protein_seq_des
  Code for our paper "Protein sequence design with a learned potential"
  ☆81Updated 2 years ago
• J-SNACKKB / FLIP
  A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design
  ☆109Updated last year
• BioinfoMachineLearning / DIPS-Plus
  The Enhanced Database of Interacting Protein Structures for Interface Prediction
  ☆50Updated 3 months ago
• programmablebio / pepmlm
  Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling
  ☆106Updated last month
• lujiarui / Str2Str
  Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)
  ☆80Updated last year
• A-Alpha-Bio / alphabind
  AlphaBind code + model accompanying pre-print
  ☆86Updated 4 months ago
• evo-design / protein-dpo
  Aligning protein generative models with experimental fitness
  ☆114Updated last month
• oxpig / AntiFold
  Improved antibody structure-based design using inverse folding
  ☆145Updated this week
• leeyang / DRfold
  ☆42Updated 2 years ago
• AstraZeneca / DiffAbXL
  The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…
  ☆89Updated 6 months ago
• WillHua127 / EnzymeFlow
  Official repository of EnzymeFlow
  ☆97Updated last year
• Wangchentong / Proteus
  Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.
  ☆84Updated last year
• Graylab / IgLM
  Generative Language Modeling for Antibody Design
  ☆173Updated last year
• TencentAI4S / IgGM
  Official Implementation of IgGM
  ☆164Updated 2 weeks ago
• Graylab / GeoDock
  Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.
  ☆98Updated last year
• anton-bushuiev / PPIRef
  Dataset and package for working with protein-protein interactions in 3D
  ☆98Updated 7 months ago
• jproney / AF2Rank
  ☆114Updated 3 years ago
• HeliXonProtein / binding-ddg-predictor
  open source repository
  ☆143Updated 2 years ago
• oxpig / Graphinity
  Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
  ☆56Updated 5 months ago
• levinthal / Pallatom
  ☆131Updated 6 months ago
• melobio / EvoPlay
  ☆77Updated 2 years ago
• wengong-jin / abdockgen
  ☆107Updated 2 years ago
• OATML-Markslab / ProteinNPT
  Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"
  ☆125Updated 3 weeks ago
• alexechu / protpardelle
  ☆65Updated 2 years ago
• piercelab / antibody_benchmark
  Antibody-Antigen Docking and Affinity Benchmark
  ☆75Updated 5 years ago
• THUNLP-MT / dyMEAN
  This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"
  ☆122Updated 9 months ago
• zhengkangjie / ESM-AA
  ☆75Updated 10 months ago
• oxpig / AbLang
  AbLang: A language model for antibodies
  ☆154Updated 2 years ago
• oxpig / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆50Updated 2 years ago
• varun-shanker / structural-evolution
  ☆116Updated last year