☆20Mar 20, 2025Updated last year
Alternatives and similar repositories for PPI-Graphomer
Users that are interested in PPI-Graphomer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Scores for Hydrophobicity and Charges based on SASAs☆44Jun 12, 2025Updated last year
- The official repository for TherML - a machine learning approach to predict scFv and antibody thermostability☆14Sep 8, 2023Updated 2 years ago
- Computationally Restoring the Potency of a Clinical Antibody☆20Mar 1, 2024Updated 2 years ago
- ☆53Apr 23, 2026Updated last month
- Dataset with quantitative binding scores of scFv-format antibodies against SARS-CoV-2 target peptide☆28Mar 30, 2023Updated 3 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆25May 14, 2019Updated 7 years ago
- Collection of tools to calculate properties of natural or synthetic peptides and proteins.☆73Apr 13, 2026Updated 2 months ago
- ☆41Aug 1, 2025Updated 10 months ago
- Deep learning tools for peptide substrate prediction and generation☆44Nov 20, 2025Updated 7 months ago
- AI/ML Based QSAR Modeling and Translation to Deployable QSAR WebApps☆21Oct 26, 2025Updated 7 months ago
- ☆15Jan 31, 2026Updated 4 months ago
- workflow used to prepare PPB-Affinity database☆31Aug 22, 2024Updated last year
- ProQDock is a Protein-Protein docking scoring program that uses high level coordinate driven features compiled and trained by a Support V…☆11Dec 11, 2021Updated 4 years ago
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆128Jan 28, 2026Updated 4 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Supernova's MM-PBSA binding free energy calculation tool.☆12Jun 14, 2026Updated last week
- What exactly are the non-canonical amino acids in the Rosetta database folder?☆12Feb 16, 2020Updated 6 years ago
- Official code base for "General Binding Affinity Guidance for Diffusion Models in Structure-Based Drug Design"☆13Jul 18, 2025Updated 11 months ago
- ☆25Jan 4, 2024Updated 2 years ago
- Source code of Venus-MAXWELL: Efficient Learning of Protein-Mutation Stability Landscapes using Protein Language Models☆25Jun 3, 2025Updated last year
- DualBind is a 3D structure-based deep learning model with a dual-loss framework for accurate and fast protein-ligand binding affinity pre…☆23Oct 21, 2025Updated 8 months ago
- Apo2Mol: 3D Molecule Generation via Dynamic Pocket-Aware Diffusion Models☆35May 12, 2026Updated last month
- NeuralMD for Protein-ligand Binding Simulation, Nature Communicaitons 2025 https://www.nature.com/articles/s41467-025-67808-z☆49Nov 4, 2025Updated 7 months ago
- Structure-based fragment identification in latent space☆30Mar 4, 2026Updated 3 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- The data and standalone program of ESM-DBP☆10Jun 25, 2024Updated last year
- Energy minimization post-processing used in PoseBusters☆14Apr 4, 2025Updated last year
- 基于大模型搭建的聊天机器人，同时支持 微信公众号、企业微信应用、飞书、钉钉 等接入，可选择GPT3.5/GPT-4o/GPT4.0/ Claude/文心一言/讯飞星火/通义千问/ Gemini/GLM-4/Claude/Kimi/LinkAI，能处理文本、语音和图片，访问操…☆11Feb 4, 2025Updated last year
- ☆54Apr 1, 2025Updated last year
- Vabs-Net: Pre-Training Protein Bi-level Representation Through Span Mask Strategy On 3D Protein Chains☆17Sep 12, 2024Updated last year
- Official implementation for our paper: Repurposing AlphaFold3-like Protein Folding Models for Antibody Sequence and Structure Co-design☆47Jan 8, 2026Updated 5 months ago
- [ICLR 2026] Official implementation of PBFM - Physics-Based Flow Matching☆67Feb 9, 2026Updated 4 months ago
- ☆105Updated this week
- gl-hosvd denoising algorithm☆17May 8, 2017Updated 9 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆11Apr 10, 2022Updated 4 years ago
- ☆30Aug 8, 2025Updated 10 months ago
- Cython bindings and Python interface to the MEME suite, a collection of tools for the analysis of sequence motifs.☆17Mar 7, 2026Updated 3 months ago
- Affinity Protein-Protein Transformers—State of the art protein-protein binding affinity in seconds!☆109Feb 18, 2025Updated last year
- MTAE-based 5UTR design model☆10Jan 23, 2024Updated 2 years ago
- ☆18Dec 5, 2025Updated 6 months ago
- A script that computationally designs a vaccine☆18Jan 9, 2022Updated 4 years ago