yunchuankong / GEDFNLinks
GEDFN: Graph-Embedded Deep Feedforward Network
☆23Updated 6 years ago
Alternatives and similar repositories for GEDFN
Users that are interested in GEDFN are comparing it to the libraries listed below
Sorting:
- Large-scale automatic feature selection for biomarker discovery in high-dimensional OMICs data☆30Updated last year
- iDeep: integrated prediction of RNA-protein binding sites using deep learning☆39Updated 4 years ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 3 years ago
- In Silico Prediction of Novel Therapeutic Targets Using Gene – Disease Association Data☆18Updated 7 years ago
- using shallow neural network layer (embedding) to infer gene-gene/sample relationship from gene expression data☆21Updated 6 years ago
- Prediction of mRNA subcellular localization using deep recurrent neural networks☆15Updated 5 years ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆26Updated last year
- MHC Class I and Class II neoantigen binding prediction☆29Updated 2 years ago
- ☆19Updated 4 years ago
- ☆10Updated 5 years ago
- Python 2.7 package with examples for evaluating a network's ability to group a given node set in network proximity.☆32Updated 2 years ago
- Knowledge-primed neural networks☆37Updated 2 years ago
- A hybrid deep convolutional neural network for predicting chromatin accessibility☆24Updated 6 years ago
- Bootstrap imputation for scRNAseq data☆12Updated 4 years ago
- Data Integration tool utilizing network information for predictive analyses☆16Updated 3 weeks ago
- Data, results, and code accompanying the manuscript: "Supervised learning is an accurate method for network-based gene classification"☆10Updated 3 years ago
- Extension of the WGCNA program to improve the eigengene similarity of modules and increase the overall number of genes in modules.☆64Updated 4 years ago
- ☆21Updated 3 years ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 2 years ago
- MVP (Qi et al 2021) source code☆16Updated 4 years ago
- A package to perform Random Walk with Restart on different types of networks☆22Updated 2 years ago
- ☆22Updated 5 years ago
- ☆14Updated 5 years ago
- For MHC-I protein-peptide binding predictions: Deep Learning model with CNN and Snakemake workflow☆12Updated 6 years ago
- Code for the analyses in the human reference interactome paper.☆27Updated 2 years ago
- ☆10Updated 3 years ago
- An unsupervised transfer learning approach for rare disease transcriptomics☆45Updated 5 years ago
- ☆38Updated last year
- Detects hotspot regions for somatic mutations in 3D protein structures☆2Updated last year
- A deep learning package for predicting TF binding☆42Updated 5 years ago