laylagerami / MAVEN
Elucidate and visualise a compound's mechanism of action by combining structure-based target prediction with gene expression-based causal reasoning, plus pathway enrichment to put results into biological context. GUI-based (minimal coding experience required).
☆12Updated last year
Related projects ⓘ
Alternatives and complementary repositories for MAVEN
- ☆28Updated 2 years ago
- 💊 Molecular informatics toolkit with integration of bioinformatics and cheminformatics tools for drug discovery☆37Updated 2 months ago
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆20Updated 4 months ago
- A Data-Driven Approach to Predicting Successes and Failures of Clinical Trials☆17Updated 5 years ago
- Repository for storing code related to the paper by Zdrazil B., Richter L., Brown N., and Guha R. "Moving Targets: Monitoring Target Tren…☆9Updated 3 years ago
- generating various molecular representations for chemicals, proteins, DNAs/RNAs and their interactions.☆16Updated 5 years ago
- ☆23Updated last week
- A high throughput automated drug discovery pipeline.☆29Updated 6 years ago
- a collection of colabs useful for molecular biology☆27Updated 8 months ago
- ☆15Updated last year
- ☆11Updated 4 years ago
- Peptide library design☆19Updated 4 years ago
- Use machine learning to design codon-optimized DNA sequences for increased protein expression.☆15Updated 2 years ago
- Target prediction☆12Updated 4 years ago
- Predicting mechanism of action of novelcompounds using compound structure andtranscriptomic signature co-embedding☆14Updated last year
- A pragmatic interface to RDKit in R☆25Updated 5 years ago
- comparing drug classification methods☆18Updated 4 years ago
- chemmodlab: A Cheminformatics Modeling Laboratory for Fitting and Assessing Machine Learning Models☆15Updated last year
- ☆14Updated last year
- ☆14Updated 5 years ago
- FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…☆13Updated 2 years ago
- Package to analyze Mass Spec Data☆11Updated last year
- Computational Analysis of Novel Drug Opportunities☆35Updated this week
- Core Utils for Mass Spectrometry Data☆16Updated last month
- ☆21Updated last year
- 🧬 Toolkit for generating various numerical features of protein sequences☆52Updated 2 months ago
- Chemical Similarity Enrichment analysis of metabolomics datasets☆27Updated 4 months ago
- StarGazer is a tool designed for rapidly assessing drug repositioning opportunities. It combines multi-source, multi-omics data with a no…☆32Updated last year
- An R package framework for accessing biological and chemical databases and developing or extending new connectors.☆11Updated last year
- ☆14Updated 7 years ago