An awesome list of resources for reproducible research in R. Includes a table of comparison for different tools.
☆17Dec 21, 2024Updated last year
Alternatives and similar repositories for awesome-reproducible-R
Users that are interested in awesome-reproducible-R are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- beRi "beri environments for R installations" is an R environment, R installation, and R package management system for R☆14Dec 23, 2025Updated 6 months ago
- Creating virtual environments for R.☆17Oct 24, 2019Updated 6 years ago
- Short course on reproducible science: what, why, how☆22Jan 12, 2025Updated last year
- This site provides information on conducting reproducible science using the R language.☆13Nov 2, 2016Updated 9 years ago
- deploy a snakemake pipeline directly from version control (under development)☆26Jun 18, 2026Updated last week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- The is mostly a wrapper tool using phyloseq and microbiome R packages.☆32Nov 23, 2022Updated 3 years ago
- Launch a distributed R server on a cluster from a remote R session☆12Apr 23, 2022Updated 4 years ago
- R package for annotating metagenomic datasets with taxonomic information☆10Feb 11, 2020Updated 6 years ago
- A showcase based on the tutorial presented at ML@Enterprise Forum 2018 in Warsaw.☆12Oct 10, 2018Updated 7 years ago
- Tutorials☆15Apr 2, 2022Updated 4 years ago
- Creating Debian Packages from CRAN Sources☆12Jul 1, 2020Updated 6 years ago
- Lab notebook for people who like the command line.☆11Mar 6, 2026Updated 3 months ago
- STAMPS 2018 course☆14Aug 8, 2018Updated 7 years ago
- A R package to create a minimal template for scientific manuscripts in .docx☆11Jan 15, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Template for a computational lab notebook using bookdown☆13Mar 16, 2018Updated 8 years ago
- Course materials for WILD6900: Applied Bayesian Analysis for Ecological Data☆15Jan 29, 2024Updated 2 years ago
- The BioJS MSA viewer wrapped into an R package☆12Sep 27, 2016Updated 9 years ago
- RStudio addin to search CRAN packages titles and descriptions☆35Mar 12, 2019Updated 7 years ago
- Flexible R Pipelines with Caching☆12Sep 1, 2018Updated 7 years ago
- A basic science lab framework aimed at reproducibility and lab management.☆15May 22, 2026Updated last month
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆14Jan 31, 2024Updated 2 years ago
- A mobile-responsive demo flask website that includes a login page.☆24Apr 28, 2026Updated 2 months ago
- Seamless navigation through combined results of set-based and network-based enrichment analysis☆22Apr 30, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- RZabbix is an R wrapper for Zabbix API.☆12Nov 28, 2016Updated 9 years ago
- User-friendly Bioinformatics Tools☆18Mar 5, 2021Updated 5 years ago
- Protein scoring and sampling of 'Combinatorial Variant Effects from Structure' (CoVES)☆11Jan 5, 2024Updated 2 years ago
- GERMLINE is an algorithm for inferring long shared segments of Identity by Descent (IBD) between pairs of individuals in a large populati…☆16Apr 5, 2019Updated 7 years ago
- Three-Dimensional Vector Operations in R☆17Mar 11, 2024Updated 2 years ago
- R package to compute pagerank of CRAN packages☆10Mar 18, 2016Updated 10 years ago
- Solution to Kaggle Santa 2021 Challenge☆14Jan 18, 2022Updated 4 years ago
- microbial association network clustering algorithm☆14Dec 14, 2023Updated 2 years ago
- Gene Expression Omnibus Analysis with Shiny☆41Jun 2, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- R interface to GenBank/GenPept files☆14Jan 12, 2021Updated 5 years ago
- SUmmarizing Multiple Enrichment analysis Results☆10Nov 14, 2024Updated last year
- Software to process, statistically analyse and visualise deep mutational scanning data☆14Apr 28, 2026Updated 2 months ago
- PyPI package for traversing extremely large FTP directory trees☆18Dec 18, 2017Updated 8 years ago
- ☆12Feb 1, 2026Updated 5 months ago
- Reproducible Research Tools☆19Oct 3, 2019Updated 6 years ago
- Interoperate R with Python☆61May 1, 2026Updated 2 months ago