An awesome list of resources for reproducible research in R. Includes a table of comparison for different tools.
☆17Dec 21, 2024Updated last year
Alternatives and similar repositories for awesome-reproducible-R
Users that are interested in awesome-reproducible-R are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- beRi "beri environments for R installations" is an R environment, R installation, and R package management system for R☆14Dec 23, 2025Updated 7 months ago
- Framework for running text mining tools on latest publications. Main page at:☆15Jul 13, 2022Updated 4 years ago
- Creating virtual environments for R.☆17Oct 24, 2019Updated 6 years ago
- Computable build reports, package metadata, and download stats from the Bioconductor project☆22Jul 17, 2026Updated 3 weeks ago
- Short course on reproducible science: what, why, how☆22Jan 12, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- This site provides information on conducting reproducible science using the R language.☆13Nov 2, 2016Updated 9 years ago
- deploy a snakemake pipeline directly from version control (under development)☆27Jun 18, 2026Updated last month
- Launch a distributed R server on a cluster from a remote R session☆12Apr 23, 2022Updated 4 years ago
- R package for annotating metagenomic datasets with taxonomic information☆10Feb 11, 2020Updated 6 years ago
- Tutorials☆15Apr 2, 2022Updated 4 years ago
- A curated list of reproducible research case studies, projects, tutorials, and media☆401Jul 20, 2026Updated 3 weeks ago
- Lab notebook for people who like the command line.☆11Mar 6, 2026Updated 5 months ago
- STAMPS 2018 course☆14Aug 8, 2018Updated 8 years ago
- A R package to create a minimal template for scientific manuscripts in .docx☆11Jan 15, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- RStudio addin to search CRAN packages titles and descriptions☆35Mar 12, 2019Updated 7 years ago
- A basic science lab framework aimed at reproducibility and lab management.☆15May 22, 2026Updated 2 months ago
- An easy to use and comprehensive python package which aids in the analysis and visualization of orthologous genes. 🐵☆28Jul 14, 2026Updated 3 weeks ago
- A mobile-responsive demo flask website that includes a login page.☆24Apr 28, 2026Updated 3 months ago
- CRAN Package WriteXLS: Cross-platform Perl based R function to create Excel 2003 (XLS) and Excel 2007 (XLSX) files from one or more data …☆19May 22, 2025Updated last year
- Seamless navigation through combined results of set-based and network-based enrichment analysis☆22Apr 30, 2026Updated 3 months ago
- User-friendly Bioinformatics Tools☆18Mar 5, 2021Updated 5 years ago
- Build stream with a sample CGE for using GTAP data in economic modeling☆11Nov 7, 2017Updated 8 years ago
- Protein scoring and sampling of 'Combinatorial Variant Effects from Structure' (CoVES)☆11Jan 5, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- microbial association network clustering algorithm☆14Dec 14, 2023Updated 2 years ago
- Three-Dimensional Vector Operations in R☆17Mar 11, 2024Updated 2 years ago
- R package to compute pagerank of CRAN packages☆10Mar 18, 2016Updated 10 years ago
- Code and other goodies from the SCAR Retrospective Analysis of Antarctic Tracking Data (RAATD) project☆13Feb 17, 2024Updated 2 years ago
- Gene Expression Omnibus Analysis with Shiny☆41Jun 2, 2022Updated 4 years ago
- The dysbiosisR package implements tools for calculating some common microbiome dysbiosis measures☆16Dec 2, 2022Updated 3 years ago
- R interface to GenBank/GenPept files☆14Jan 12, 2021Updated 5 years ago
- Template for a computational lab notebook using bookdown☆13Mar 16, 2018Updated 8 years ago
- Software to process, statistically analyse and visualise deep mutational scanning data☆14Aug 3, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Anonymous function creation in R and purrr☆14Jan 11, 2020Updated 6 years ago
- PyPI package for traversing extremely large FTP directory trees☆18Dec 18, 2017Updated 8 years ago
- ☆12Feb 1, 2026Updated 6 months ago
- Syntax highlighter for R☆31Jan 17, 2019Updated 7 years ago
- Interoperate R with Python☆61May 1, 2026Updated 3 months ago
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Sep 20, 2023Updated 2 years ago
- Conveniently issue messages, warnings, and errors☆13Jul 7, 2021Updated 5 years ago