An awesome list of resources for reproducible research in R. Includes a table of comparison for different tools.
☆17Dec 21, 2024Updated last year
Alternatives and similar repositories for awesome-reproducible-R
Users that are interested in awesome-reproducible-R are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- beRi "beri environments for R installations" is an R environment, R installation, and R package management system for R☆14Dec 23, 2025Updated 6 months ago
- Framework for running text mining tools on latest publications. Main page at:☆15Jul 13, 2022Updated 4 years ago
- Creating virtual environments for R.☆17Oct 24, 2019Updated 6 years ago
- Computable build reports, package metadata, and download stats from the Bioconductor project☆22Updated this week
- Short course on reproducible science: what, why, how☆22Jan 12, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- This site provides information on conducting reproducible science using the R language.☆13Nov 2, 2016Updated 9 years ago
- The is mostly a wrapper tool using phyloseq and microbiome R packages.☆32Nov 23, 2022Updated 3 years ago
- deploy a snakemake pipeline directly from version control (under development)☆26Jun 18, 2026Updated last month
- Launch a distributed R server on a cluster from a remote R session☆12Apr 23, 2022Updated 4 years ago
- R package for annotating metagenomic datasets with taxonomic information☆10Feb 11, 2020Updated 6 years ago
- A curated list of reproducible research case studies, projects, tutorials, and media☆394Updated this week
- Lab notebook for people who like the command line.☆11Mar 6, 2026Updated 4 months ago
- A R package to create a minimal template for scientific manuscripts in .docx☆11Jan 15, 2022Updated 4 years ago
- RStudio addin to search CRAN packages titles and descriptions☆35Mar 12, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- The BioJS MSA viewer wrapped into an R package☆12Sep 27, 2016Updated 9 years ago
- Flexible R Pipelines with Caching☆12Sep 1, 2018Updated 7 years ago
- A basic science lab framework aimed at reproducibility and lab management.☆15May 22, 2026Updated 2 months ago
- An easy to use and comprehensive python package which aids in the analysis and visualization of orthologous genes. 🐵☆28Jul 14, 2026Updated last week
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆14Jan 31, 2024Updated 2 years ago
- A mobile-responsive demo flask website that includes a login page.☆24Apr 28, 2026Updated 2 months ago
- Seamless navigation through combined results of set-based and network-based enrichment analysis☆22Apr 30, 2026Updated 2 months ago
- User-friendly Bioinformatics Tools☆18Mar 5, 2021Updated 5 years ago
- Python tools for Morse Smale Complex analysis and visualization☆14Nov 10, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- microbial association network clustering algorithm☆14Dec 14, 2023Updated 2 years ago
- Three-Dimensional Vector Operations in R☆17Mar 11, 2024Updated 2 years ago
- R package to compute pagerank of CRAN packages☆10Mar 18, 2016Updated 10 years ago
- Gene Expression Omnibus Analysis with Shiny☆41Jun 2, 2022Updated 4 years ago
- SUmmarizing Multiple Enrichment analysis Results☆10Nov 14, 2024Updated last year
- The dysbiosisR package implements tools for calculating some common microbiome dysbiosis measures☆16Dec 2, 2022Updated 3 years ago
- R interface to GenBank/GenPept files☆14Jan 12, 2021Updated 5 years ago
- Template for a computational lab notebook using bookdown☆13Mar 16, 2018Updated 8 years ago
- Software to process, statistically analyse and visualise deep mutational scanning data☆14Apr 28, 2026Updated 2 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Anonymous function creation in R and purrr☆14Jan 11, 2020Updated 6 years ago
- PyPI package for traversing extremely large FTP directory trees☆18Dec 18, 2017Updated 8 years ago
- Low-level Python interface to Sun Grid Engine☆19Jul 21, 2012Updated 14 years ago
- ☆12Feb 1, 2026Updated 5 months ago
- Interoperate R with Python